RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 INTS10Q9NVR2 710 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 DUS2Q9NX74 493 aaKnown RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 MARCH4Q9P2E8 410 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 NFKBIL1Q9UBC1 381 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 DKK3Q9UBP4 350 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 EVLQ9UI08 416 aaPredicted RBP6.8□□□□□ -1.32
MSH5-217ENST00000494458 VPS9D1Q9Y2B5 631 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 C2orf16Q68DN1 1984 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 MYLKQ15746 1914 aa6.8□□□□□ -1.32
MSH5-217ENST00000494458 ATXN2Q99700 1313 aaKnown RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 A0A096LPK6 155 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 FAM95CA0A1B0GW59 222 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 A0A1W2PPC1 479 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 CAPN8A6NHC0 703 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 CCDC85CA6NKD9 419 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ANHXE9PGG2 379 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 G3V2L1 256 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 GOLGA8TH3BQL2 631 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 NDUFAB1O14561 156 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TRIM24O15164 1050 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TULP3O75386 442 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ECI2O75521 394 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 KLHL2O95198 593 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 IGSF6O95976 241 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ADH5P11766 374 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 LAMP2P13473 410 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 FDXRP22570 491 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 SERPINA4P29622 427 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 HNF1BP35680 557 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 OPRD1P41143 372 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 DGKGP49619 791 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 STK19P49842 368 aaPredicted RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 TAS2R39P59534 338 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 RAB10P61026 200 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 MPP1Q00013 466 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 OCRLQ01968 901 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 CREB5Q02930 508 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 BCL2L1Q07817 233 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 THOC5Q13769 683 aaKnown RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 SEMA3AQ14563 771 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 PTPRCAPQ14761 206 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ATAT1Q5SQI0 421 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 RARS2Q5T160 578 aaKnown RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 N4BP2L1Q5TBK1 243 aaPredicted RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 HHATQ5VTY9 493 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ZNF470Q6ECI4 717 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 MRNIPQ6NTE8 343 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 FOXR1Q6PIV2 292 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 CNSTQ6PJW8 725 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 AFTPHQ6ULP2 937 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 VITQ6UXI7 678 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TPRG1Q6ZUI0 275 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 GLT6D1Q7Z4J2 308 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 CMC1Q7Z7K0 106 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 C12orf40Q86WS4 652 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TRIM42Q8IWZ5 723 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 MICALL1Q8N3F8 863 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 OR4K2Q8NGD2 314 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 RDH11Q8TC12 318 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 BLOC1S5Q8TDH9 187 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 LPGAT1Q92604 370 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 RMDN1Q96DB5 314 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 RPL10LQ96L21 214 aaKnown RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 C7orf26Q96N11 449 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 BIRC8Q96P09 236 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 FAM111AQ96PZ2 611 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 SMIM14Q96QK8 99 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 OLFM1Q99784 485 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 PLA2G2FQ9BZM2 168 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 SLC13A1Q9BZW2 595 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 P2RY12Q9H244 342 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TMEM245Q9H330 911 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ZNF576Q9H609 170 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 SUDS3Q9H7L9 328 aaPredicted RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 ZFP14Q9HCL3 533 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TRPV5Q9NQA5 729 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 LATS2Q9NRM7 1088 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 IGSF5Q9NSI5 407 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 PCMTD2Q9NV79 361 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ELOVL2Q9NXB9 296 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TMEM216Q9P0N5 145 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 TXNDC16Q9P2K2 825 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 EPS15L1Q9UBC2 864 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 COPG2Q9UBF2 871 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 HECAQ9UBI9 543 aaPredicted RBP6.79□□□□□ -1.32
MSH5-217ENST00000494458 HAO1Q9UJM8 370 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 SLC25A13Q9UJS0 675 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 HCN2Q9UL51 889 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ACOT9Q9Y305 439 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 VWA7Q9Y334 891 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 ZNF711Q9Y462 761 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 PCDHB9Q9Y5E1 797 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 WASF2Q9Y6W5 498 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 CEP290O15078 2479 aa6.79□□□□□ -1.32
MSH5-217ENST00000494458 DOCK8Q8NF50 2099 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 LAMA3Q16787 3333 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 MIA3Q5JRA6 1907 aa6.78□□□□□ -1.32
MSH5-217ENST00000494458 BPTFQ12830 3046 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms