RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 MBD3L3A6NE82 208 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 CLCA1A8K7I4 914 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 L7N2F9 121 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RNF103O00237 685 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PSMD14O00487 310 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PRAMEF2O60811 474 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 DAB1O75553 588 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PAPSS2O95340 614 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TNFRSF6BO95407 300 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 STAMBPO95630 424 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PAHP00439 452 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ENO1P06733 434 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ANXA2P07355 339 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 HOXC6P09630 235 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TSPY4P0CV99 314 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TSPY10P0CW01 314 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PDHBP11177 359 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TM4SF1P30408 202 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RDXP35241 583 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 USP8P40818 1118 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ATP5OP48047 213 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 DGKQP52824 942 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RARSP54136 660 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 HDAC4P56524 1084 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 YBEYP58557 167 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 GMFBP60983 142 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 C17orf67Q0P5P2 114 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RALGDSQ12967 914 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RPA4Q13156 261 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 DNASE1L3Q13609 305 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 CUL4BQ13620 913 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 NFE2L1Q14494 772 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MXD4Q14582 209 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TBCEQ15813 527 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TYSND1Q2T9J0 566 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MAJINQ3KP22 176 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC40Q4G0X9 1142 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 FILIP1LQ4L180 1135 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 XKR9Q5GH70 373 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 BMP2KLQ5H9B9 411 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 FAXCQ5TGI0 409 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ARL6IP4Q66PJ3 421 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ATG16L1Q676U5 607 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 WDR93Q6P2C0 686 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ATF7IPQ6VMQ6 1270 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MEX3BQ6ZN04 569 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 FAM83HQ6ZRV2 1179 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RAB11FIP2Q7L804 512 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ANKS1BQ7Z6G8 1248 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TMEM200AQ86VY9 491 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 GATAD2AQ86YP4 633 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC117Q8IWD4 279 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 CCDC13Q8IYE1 715 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 VPS52Q8N1B4 723 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 DCLK2Q8N568 766 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 METTL25Q8N6Q8 603 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 POMGNT2Q8NAT1 580 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TDRD5Q8NAT2 981 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 LINS1Q8NG48 757 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 OR6C4Q8NGE1 309 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 OR56A3Q8NH54 315 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 KIF18AQ8NI77 898 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 SUN5Q8TC36 379 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 ELP5Q8TE02 316 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 NOC3LQ8WTT2 800 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 SEPT1Q8WYJ6 367 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 VPS33AQ96AX1 596 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 NMD3Q96D46 503 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 KTI12Q96EK9 354 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PGAP3Q96FM1 320 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 RMDN2Q96LZ7 410 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 CEP295NLQ96MC4 621 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 WDR24Q96S15 920 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 GDF15Q99988 308 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 SLC39A3Q9BRY0 314 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MAK16Q9BXY0 300 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TRIM2Q9C040 744 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 KRT23Q9C075 422 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 LRRCC1Q9C099 1032 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 SLC7A5P2Q9GIP4 190 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 STMN4Q9H169 189 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MMADHCQ9H3L0 296 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 NDST4Q9H3R1 872 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MUC13Q9H3R2 512 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 NOD2Q9HC29 1040 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 POLE3Q9NRF9 147 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 THSD1Q9NS62 852 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 SIRT3Q9NTG7 399 aaPredicted RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 DDX18Q9NVP1 670 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 TAB2Q9NYJ8 693 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 COQ3Q9NZJ6 369 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 NDUFAF4Q9P032 175 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 C5AR2Q9P296 337 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 IGSF9Q9P2J2 1179 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 IL19Q9UHD0 177 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 PTBP2Q9UKA9 531 aaKnown RBP2.29□□□□□ -2.04
PTPN12-212ENST00000494248 MTUS1Q9ULD2 1270 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 VPS4AQ9UN37 437 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 EXOC7Q9UPT5 735 aa2.29□□□□□ -2.04
PTPN12-212ENST00000494248 LIPT1Q9Y234 373 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms