RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 IGF2-ASQ6U949 168 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 RFLNAQ6ZTI6 216 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 LRRC49Q8IUZ0 686 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 KYQ8NBH2 561 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 ATXN7L3BQ96GX2 97 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 GFM1Q96RP9 751 aaKnown RBP13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 MGME1Q9BQP7 344 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 STRADBQ9C0K7 418 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 WDR26Q9H7D7 661 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 FGF22Q9HCT0 170 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 PHPT1Q9NRX4 125 aaPredicted RBP13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 PHTF1Q9UMS5 762 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 PCDHGA8Q9Y5G5 932 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 RAI2Q9Y5P3 530 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 KIF26BQ2KJY2 2108 aa13.42□□□□□ -0.26
CTDSP1-212ENST00000494067 CCDC187A0A096LP49 1063 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 TK2O00142 265 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 KLK10O43240 276 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 FUCA1P04066 466 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 PTMSP20962 102 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 HNRNPH3P31942 346 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 VIPR1P32241 457 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 GJC1P36383 396 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 MMP13P45452 471 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 TLE3Q04726 772 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 ITKQ08881 620 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 EIF3IQ13347 325 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 BIRC2Q13490 618 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 DENND2CQ68D51 928 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 NCBP2-AS2Q69YL0 99 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 TIGD7Q6NT04 549 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 PNCKQ6P2M8 343 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 USP45Q70EL2 814 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 TSPAN33Q86UF1 283 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 MAP7D3Q8IWC1 876 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 CBARPQ8N350 705 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 LSM14AQ8ND56 463 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 FAM46DQ8NEK8 389 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 CCL4L1Q8NHW4 92 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 ZNF564Q8TBZ8 553 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 KIAA1524Q8TCG1 905 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 CCDC74AQ96AQ1 378 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 NUS1Q96E22 293 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 PRR11Q96HE9 360 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 HIC2Q96JB3 615 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 COQ10AQ96MF6 247 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 TMEM74Q96NL1 305 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 SLC46A1Q96NT5 459 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 DPEP2Q9H4A9 486 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 RCOR3Q9P2K3 495 aaPredicted RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 LCMT1Q9UIC8 334 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 BPTFQ12830 3046 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 URB1O60287 2271 aaKnown RBP13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 BAHCC1Q9P281 2608 aa13.41□□□□□ -0.26
CTDSP1-212ENST00000494067 GOLGA6CA6NDK9 693 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 NPIPB15A6NHN6 443 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 PDHA1P08559 390 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 GOLGA6DP0CG33 693 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 GLB1P16278 677 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 CA4P22748 312 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 TRIM23P36406 574 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 C19orf57Q0VDD7 668 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 SLC10A2Q12908 348 aaPredicted RBP13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 ARMC12Q5T9G4 340 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 HSD11B1LQ7Z5J1 315 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 TEX26Q8N6G2 289 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 PQLC3Q8N755 202 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 SPOCK2Q92563 424 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 ANP32EQ9BTT0 268 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 LRRN3Q9H3W5 708 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 EPB41L5Q9HCM4 733 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 CYP4F12Q9HCS2 524 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 ASCL3Q9NQ33 180 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 ST14Q9Y5Y6 855 aa13.4□□□□□ -0.26
CTDSP1-212ENST00000494067 PSMD11O00231 422 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 NTN3O00634 580 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 ATXN7O15265 892 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 FZD6O60353 706 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 HEXIM1O94992 359 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 TNFSF15O95150 251 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 RPLP0P05388 317 aaKnown RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 MYCLP1P12525 358 aaPredicted RBP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 PNLIPP16233 465 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 CES1P23141 567 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 ETV3P41162 512 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 EPHB1P54762 984 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 INHBCP55103 352 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 ILF3Q12906 894 aaKnown RBP eCLIP13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 FBXO39Q8N4B4 442 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 KCTD6Q8NC69 237 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 GPR156Q8NFN8 814 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 PIH1D2Q8WWB5 315 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 SLC39A7Q92504 469 aa13.39□□□□□ -0.27
CTDSP1-212ENST00000494067 SCRN2Q96FV2 425 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms