RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 USP15Q9Y4E8 981 aaPredicted RBP6.71□□□□□ -1.34
TRA2B-216ENST00000493864 B3GALT1Q9Y5Z6 326 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 DOCK8Q8NF50 2099 aa6.71□□□□□ -1.34
TRA2B-216ENST00000493864 MYOFQ9NZM1 2061 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 IGLV3-10A0A075B6K4 115 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 E2F8A0AVK6 867 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF487B1APH4 448 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 APOL1O14791 398 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 DCLK1O15075 740 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TJP3O95049 919 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TSPAN15O95858 294 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 LAMP2P13473 410 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 PECAM1P16284 738 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 FCARP24071 287 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 EPHB2P29323 1055 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SGSHP51688 502 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 VCPP55072 806 aaKnown RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TPI1P60174 286 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 IL2P60568 153 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 RPS24P62847 133 aaKnown RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 GBE1Q04446 702 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 MTA1Q13330 715 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SNX1Q13596 522 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TFDP2Q14188 446 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF77Q15935 545 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF124Q15973 351 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 C5orf22Q49AR2 442 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ALFQ53S48 1182 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SLC9A4Q6AI14 798 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TANGO2Q6ICL3 276 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 LRRC31Q6UY01 552 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 B4GALNT4Q76KP1 1039 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF572Q7Z3I7 529 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 STRA8Q7Z7C7 330 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 VSIG1Q86XK7 387 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 DDX42Q86XP3 938 aaKnown RBP eCLIP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 CCDC33Q8N5R6 958 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 CELF5Q8N6W0 485 aaKnown RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SMRP1Q8NCR6 262 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SPATA4Q8NEY3 305 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 CHTF18Q8WVB6 975 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ATG4AQ8WYN0 398 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SUSD6Q92537 303 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 DLG3Q92796 817 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 SMARCD2Q92925 531 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 HAUS1Q96CS2 278 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TMA16Q96EY4 203 aaKnown RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 RPRD1AQ96P16 312 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ASB2Q96Q27 587 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 NAP1L3Q99457 506 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 GORASP1Q9BQQ3 440 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 PLA2G2FQ9BZM2 168 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 KLC2Q9H0B6 622 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 TRPV4Q9HBA0 871 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 RBM12Q9NTZ6 932 aaKnown RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 OXSMQ9NWU1 459 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 H2AFY2Q9P0M6 372 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 RCOR3Q9P2K3 495 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 STOML2Q9UJZ1 356 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 LSM7Q9UK45 103 aaKnown RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 NEU3Q9UQ49 428 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF510Q9Y2H8 683 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 HEY1Q9Y5J3 304 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 ZFP37Q9Y6Q3 630 aaPredicted RBP6.7□□□□□ -1.34
TRA2B-216ENST00000493864 DENND4AQ7Z401 1863 aa6.7□□□□□ -1.34
TRA2B-216ENST00000493864 HEPACAM2A8MVW5 462 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 F5H5T6 163 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 DVL2O14641 736 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 MBTPS2O43462 519 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 TBL1XO60907 577 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 LATS1O95835 1130 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 IL9P15248 144 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ZFXP17010 805 aaPredicted RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 SP100P23497 879 aaPredicted RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 HOXC13P31276 330 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 HTR7P34969 479 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 KCNJ1P48048 391 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ZNF135P52742 658 aaPredicted RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 MRPS25P82663 173 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 OTUD4Q01804 1114 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 CKAP4Q07065 602 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 C2orf54Q08AI8 447 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 PAFAH1B3Q15102 231 aaKnown RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 KCTD19Q17RG1 926 aaPredicted RBP6.69□□□□□ -1.34
TRA2B-216ENST00000493864 FAM182AQ5T1J6 154 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 CD276Q5ZPR3 534 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 NCBP2-AS2Q69YL0 99 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 VASNQ6EMK4 673 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 TTC27Q6P3X3 843 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 PARM1Q6UWI2 310 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 LIPIQ6XZB0 460 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 TFAP2DQ7Z6R9 452 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 NLRP14Q86W24 1093 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 FAM129CQ86XR2 697 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 TMEM25Q86YD3 366 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 KLHL7Q8IXQ5 586 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 FAM217AQ8IXS0 508 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 ADGRG2Q8IZP9 1017 aa6.69□□□□□ -1.34
TRA2B-216ENST00000493864 CEP112Q8N8E3 955 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms