RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	NR1D2	Q14995	579 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	PTPRR	Q15256	657 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	PPP1R15B	Q5SWA1	713 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	TMEM164	Q5U3C3	297 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	TRIM72	Q6ZMU5	477 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	ARHGAP12	Q8IWW6	846 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	TP53INP2	Q8IXH6	220 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	KIAA1524	Q8TCG1	905 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	COQ10A	Q96MF6	247 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	TAAR9	Q96RI9	348 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	EPN3	Q9H201	632 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	B4GALT6	Q9UBX8	382 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	B3GALT1	Q9Y5Z6	326 aa		13.71	□□□□□ -0.21
SAMM50-204	ENST00000493161	FLNC	Q14315	2725 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	RELN	P78509	3460 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	FGF10	O15520	208 aa	Predicted RBP	13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	CALB1	P05937	261 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	MYCLP1	P12525	358 aa	Predicted RBP	13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	CSF2RB	P32927	897 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	UGT1A3	P35503	534 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	GNPDA1	P46926	289 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	SCNN1B	P51168	640 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	POLE2	P56282	527 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	IGFBP7	Q16270	282 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	DENND2C	Q68D51	928 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	DNAJC24	Q6P3W2	148 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	BORA	Q6PGQ7	559 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	SLC30A9	Q6PML9	568 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	HEATR4	Q86WZ0	1026 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	NAGS	Q8N159	534 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	NPW	Q8N729	165 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	ZNF564	Q8TBZ8	553 aa	Predicted RBP	13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	ART4	Q93070	314 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	NUS1	Q96E22	293 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	CNPY3	Q9BT09	278 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	B3GNT4	Q9C0J1	378 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	CLSTN2	Q9H4D0	955 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	OCIAD1	Q9NX40	245 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	SUFU	Q9UMX1	484 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161	PCDHGA3	Q9Y5H0	932 aa		13.7	□□□□□ -0.22
SAMM50-204	ENST00000493161		A0A0U1RQS6	177 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	ARHGAP42	A6NI28	874 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	DFFA	O00273	331 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	HGS	O14964	777 aa	Predicted RBP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	EEF1G	P26641	437 aa	Known RBP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	ETV3	P41162	512 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	ATP1A2	P50993	1020 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	LIMK2	P53671	638 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	CTBS	Q01459	385 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	ILF3	Q12906	894 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	KCNAB2	Q13303	367 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	KRT31	Q15323	416 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	CNGA3	Q16281	694 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	HSD11B1L	Q7Z5J1	315 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	IL22RA1	Q8N6P7	574 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	ARFGAP1	Q8N6T3	406 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	PAF1	Q8N7H5	531 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	PEBP4	Q96S96	227 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	KCTD15	Q96SI1	283 aa	Predicted RBP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	CINP	Q9BW66	212 aa	Predicted RBP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	TEX101	Q9BY14	249 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	SEPT11	Q9NVA2	429 aa	Known RBP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	ANKMY1	Q9P2S6	941 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	AP4E1	Q9UPM8	1137 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	SIK3	Q9Y2K2	1263 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	PCDHGC4	Q9Y5F7	938 aa		13.69	□□□□□ -0.22
SAMM50-204	ENST00000493161	IGHV1OR21-1	A0A087WYE8	117 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	EEF2K	O00418	725 aa	Known RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	NKX2-8	O15522	239 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	ERCC2	P18074	760 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	TNFAIP3	P21580	790 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	LHCGR	P22888	699 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	AIF1	P55008	147 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	POLR2L	P62875	67 aa	Known RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	CDK3	Q00526	305 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	NSUN2	Q08J23	767 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	SLC10A7	Q0GE19	358 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	TSR1	Q2NL82	804 aa	Known RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	RFLNA	Q6ZTI6	216 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	ZNF761	Q86XN6	746 aa	Predicted RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	LURAP1L	Q8IV03	231 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	CACNA2D3	Q8IZS8	1091 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	CBARP	Q8N350	705 aa	Predicted RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	OR4D9	Q8NGE8	314 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	AGPAT1	Q99943	283 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	GSDMC	Q9BYG8	508 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	ADNP	Q9H2P0	1102 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	DHX35	Q9H5Z1	703 aa	Known RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	SLC39A1	Q9NY26	324 aa		13.68	□□□□□ -0.22
SAMM50-204	ENST00000493161	DOPEY2	Q9Y3R5	2298 aa		13.67	□□□□□ -0.22
SAMM50-204	ENST00000493161	TRBV23OR9-2	A0A075B6M9	112 aa		13.67	□□□□□ -0.22
SAMM50-204	ENST00000493161	PDE2A	O00408	941 aa	Predicted RBP	13.67	□□□□□ -0.22
SAMM50-204	ENST00000493161	DUX1	O43812	170 aa		13.67	□□□□□ -0.22
SAMM50-204	ENST00000493161	HEXIM1	O94992	359 aa	Known RBP	13.67	□□□□□ -0.22
SAMM50-204	ENST00000493161	THRA	P10827	490 aa		13.67	□□□□□ -0.22
SAMM50-204	ENST00000493161	ADCY8	P40145	1251 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms