RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 CHPFQ8IZ52 775 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CACNA2D3Q8IZS8 1091 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CYP4X1Q8N118 509 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 STK40Q8N2I9 435 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 OR13C4Q8NGS5 318 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 GABPB2Q8TAK5 448 aaPredicted RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CHMP6Q96FZ7 201 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 DNAJC1Q96KC8 554 aaKnown RBP14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ACOX2Q99424 681 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 SELENOSQ9BQE4 189 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 GPR63Q9BZJ6 419 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 ZDHHC4Q9NPG8 344 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 NSMCE4AQ9NXX6 385 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CACNA2D2Q9NY47 1150 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 PPIL1Q9Y3C6 166 aa14.11□□□□□ -0.15
PDZRN3-210ENST00000492909 CKAP5Q14008 2032 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 IQANK1A0A1B0GTG1 560 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 GOLGA8TH3BQL2 631 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC7A4O43246 635 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 UGT1A9O60656 530 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 RPP40O75818 363 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 SRFP11831 508 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 GLULP15104 373 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 HNF1BP35680 557 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 HMGCLP35914 325 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 ACTN3Q08043 901 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 TDGQ13569 410 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 THOC5Q13769 683 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 ENPP2Q13822 863 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 PON2Q15165 354 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 PTPRRQ15256 657 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF805Q5CZA5 627 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 TMEM196Q5HYL7 178 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 TEDDM1Q5T9Z0 273 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 LGSNQ5TDP6 509 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 CCDC121Q6ZUS5 278 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 OR4K2Q8NGD2 314 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 HCAR2Q8TDS4 363 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 EZH1Q92800 747 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 HDAC10Q969S8 669 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 SCRN2Q96FV2 425 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 LYSMD1Q96S90 227 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 AGAP2Q99490 1192 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 CPNE1Q99829 537 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 FAM167BQ9BTA0 163 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 CCDC134Q9H6E4 229 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 ACTR5Q9H9F9 607 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 UGT1A7Q9HAW7 530 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 UGT1A10Q9HAW8 530 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 UGT1A8Q9HAW9 530 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 IARS2Q9NSE4 1012 aaKnown RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 NLE1Q9NVX2 485 aaPredicted RBP14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC17A6Q9P2U8 582 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 DKK3Q9UBP4 350 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 MUTYHQ9UIF7 546 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 STON1Q9Y6Q2 735 aa14.1□□□□□ -0.15
PDZRN3-210ENST00000492909 TRIOO75962 3097 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 C1orf232A0A0U1RR37 186 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TSPAN11A1L157 253 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 ANTXRLA6NF34 631 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 STX7O15400 261 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 NARSO43776 548 aaKnown RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 FAM155BO75949 473 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 KRT37O76014 449 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 KRT38O76015 456 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 KRT15P19012 456 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 DRD1P21728 446 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 NFKBIAP25963 317 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 KIR2DL1P43626 348 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 SERPINB9P50453 376 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 ARSDP51689 593 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 SEC13P55735 322 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TMPRSS15P98073 1019 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 GRSF1Q12849 480 aaKnown RBP eCLIP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PTPRCAPQ14761 206 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 UGP2Q16851 508 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 GKAP1Q5VSY0 366 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 NEPROQ6NW34 567 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PACS1Q6VY07 963 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TAOK1Q7L7X3 1001 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 LYSMD3Q7Z3D4 306 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CPLX4Q7Z7G2 160 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 DSG4Q86SJ6 1040 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CNTN4Q8IWV2 1026 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TMIEQ8NEW7 156 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 OR6P1Q8NGX9 317 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CALML6Q8TD86 181 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 MSANTD3Q96H12 275 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 TBATAQ96M53 351 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 ZNF317Q96PQ6 595 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 MCCC1Q96RQ3 725 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 ZFYVE1Q9HBF4 777 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 SLC2A4RGQ9NR83 387 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 POLR3BQ9NW08 1133 aaPredicted RBP14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PKP3Q9Y446 797 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 PSAT1Q9Y617 370 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 SCN8AQ9UQD0 1980 aa14.09□□□□□ -0.15
PDZRN3-210ENST00000492909 MUC3AQ02505 3323 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms