RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, human

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP188-208	ENST00000491502	RPL6	Q02878	288 aa	Known RBP	13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	ZBTB16	Q05516	673 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	SFSWAP	Q12872	951 aa	Known RBP	13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	UNC5A	Q6ZN44	842 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	TMEM135	Q86UB9	458 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	LRRC6	Q86X45	466 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	TMEFF1	Q8IYR6	380 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	FRMD1	Q8N878	549 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	NETO1	Q8TDF5	533 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	PEX13	Q92968	403 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	ERLEC1	Q96DZ1	483 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	TUBGCP5	Q96RT8	1024 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	MKRN2	Q9H000	416 aa	Known RBP	13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	PPAN	Q9NQ55	473 aa	Known RBP	13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	PRSS16	Q9NQE7	514 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	HACD3	Q9P035	362 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	USP36	Q9P275	1121 aa	Known RBP	13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	TXNDC16	Q9P2K2	825 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	LGALS13	Q9UHV8	139 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	RABGEF1	Q9UJ41	708 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	CYP8B1	Q9UNU6	501 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	NUP205	Q92621	2012 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	SPTBN4	Q9H254	2564 aa		13.55	□□□□□ -0.24
NUP188-208	ENST00000491502	CKAP5	Q14008	2032 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SMIM23	A6NLE4	172 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502		A6NNZ2	444 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	POC1B-GALNT4	F8VUJ3	575 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	MUSK	O15146	869 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RNASEH1	O60930	286 aa	Known RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SOCS5	O75159	536 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	KRT38	O76015	456 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	POP4	O95707	220 aa	Known RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CRTAM	O95727	393 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CD160	O95971	181 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CNTF	P26441	200 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SERPINA4	P29622	427 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CD6	P30203	668 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	HOXD12	P35452	270 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SERPINB9	P50453	376 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	COPA	P53621	1224 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	BCL2L1	Q07817	233 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	MGAT5	Q09328	741 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	MTM1	Q13496	603 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CRYM	Q14894	314 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	LONRF1	Q17RB8	773 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	TUBB8	Q3ZCM7	444 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	ACCSL	Q4AC99	568 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	AASDH	Q4L235	1098 aa	Predicted RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	ANKRD20A4	Q4UJ75	823 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CERCAM	Q5T4B2	595 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	LYSMD4	Q5XG99	296 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	PDPK2P	Q6A1A2	396 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	NCEH1	Q6PIU2	408 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RABEPK	Q7Z6M1	372 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SLC26A11	Q86WA9	606 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SYT12	Q8IV01	421 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	IGDCC3	Q8IVU1	814 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CTAGE3P	Q8IX95	158 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RYBP	Q8N488	228 aa	Predicted RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SH2D3C	Q8N5H7	860 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SLC25A41	Q8N5S1	370 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	OR2AP1	Q8NGE2	309 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	FAM76A	Q8TAV0	307 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	PIGK	Q92643	395 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	FOXJ1	Q92949	421 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	ZNF669	Q96BR6	464 aa	Predicted RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RMDN1	Q96DB5	314 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	APOL2	Q9BQE5	337 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	SLC6A17	Q9H1V8	727 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	DLL3	Q9NYJ7	618 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	LHX3	Q9UBR4	397 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	CDV3	Q9UKY7	258 aa	Known RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RIMKLB	Q9ULI2	386 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	FCF1	Q9Y324	198 aa	Known RBP	13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	TCAF1	Q9Y4C2	921 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	RAI2	Q9Y5P3	530 aa		13.54	□□□□□ -0.24
NUP188-208	ENST00000491502	EDDM13	A0A1B0GTR0	161 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	KHNYN	O15037	678 aa	Known RBP	13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	KRT37	O76014	449 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	IGLV3-19	P01714	112 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	SRC	P12931	536 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	TPH1	P17752	444 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	SLCO1A2	P46721	670 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	TPMT	P51580	245 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	LIMK1	P53667	647 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	EPHB1	P54762	984 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	SKIDA1	Q1XH10	827 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	CARD16	Q5EG05	197 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	SIRPB2	Q5JXA9	342 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	ARMC12	Q5T9G4	340 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	DENND5A	Q6IQ26	1287 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	C22orf39	Q6P5X5	142 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	KDELC2	Q7Z4H8	507 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	LMNTD2	Q8IXW0	634 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	MPP5	Q8N3R9	675 aa		13.53	□□□□□ -0.24
NUP188-208	ENST00000491502	CEP76	Q8TAP6	659 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms