RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SIDT1Q9NXL6 827 aaKnown RBP13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 PCDHA7Q9UN72 937 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 ZNF451Q9Y4E5 1061 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 PLEKHM1Q9Y4G2 1056 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 PCDHGA6Q9Y5G7 932 aa13.68□□□□□ -0.22
EXOSC3-207ENST00000490516 CXorf51AA0A1B0GTR3 108 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 PRSS44E7EML9 344 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 TMCC1O94876 653 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 CEACAM5P06731 702 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 KRT5P13647 590 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 SULT1E1P49888 294 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 SUOXP51687 545 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 GEMIN4P57678 1058 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 ELOAQ14241 798 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 WDR74Q6RFH5 385 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 OLFML1Q6UWY5 402 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 WDTC1Q8N5D0 677 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 CISD2Q8N5K1 135 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 CT55Q8WUE5 264 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 ZNF396Q96N95 335 aaPredicted RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 RUFY1Q96T51 708 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 NPY6RQ99463 290 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 SLC38A3Q99624 504 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 ING2Q9H160 280 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 ACTL8Q9H568 366 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 TRNAU1APQ9NX07 287 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 SUFUQ9UMX1 484 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 MFHAS1Q9Y4C4 1052 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 POLEQ07864 2286 aa13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 MDC1Q14676 2089 aaKnown RBP13.67□□□□□ -0.22
EXOSC3-207ENST00000490516 ZSCAN5CA6NGD5 496 aaPredicted RBP13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 THAP12O43422 761 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 MED7O43513 233 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 BUB1BO60566 1050 aaPredicted RBP13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 MAP3K6O95382 1288 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 IGSF6O95976 241 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 RECKO95980 971 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 GM2AP17900 193 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 FMO5P49326 533 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 ITGA1P56199 1179 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 RPS18P62269 152 aaKnown RBP13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 DEUP1Q05D60 604 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 CDK18Q07002 472 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 CUL4AQ13619 759 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 ZRSR2Q15696 482 aaKnown RBP13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 MEA1Q16626 185 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 ERAP2Q6P179 960 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 PNCKQ6P2M8 343 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 C11orf57Q6ZUT1 292 aaPredicted RBP13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 ZSWIM9Q86XI8 627 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 LMO3Q8TAP4 145 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 ELMO2Q96JJ3 720 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 EXOC2Q96KP1 924 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 KREMEN1Q96MU8 473 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 RUBCNLQ9H714 662 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 DNAI1Q9UI46 699 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 HPCAL4Q9UM19 191 aa13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 NIPBLQ6KC79 2804 aaeCLIP13.66□□□□□ -0.22
EXOSC3-207ENST00000490516 SPG11Q96JI7 2443 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 TSPAN11A1L157 253 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 LRRTM2O43300 516 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 BUB1O43683 1085 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ZG16O60844 167 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 NDUFA10O95299 355 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ERBB2P04626 1255 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ETFBP38117 255 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ADCY8P40145 1251 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ACTR1BP42025 376 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 MAPK9P45984 424 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ME1P48163 572 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 RNASE9P60153 205 aaKnown RBP13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ACTR1AP61163 376 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 RHOAP61586 193 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 PTK2Q05397 1052 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 RALGDSQ12967 914 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 TESK1Q15569 626 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 UGT8Q16880 541 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 PLEKHN1Q494U1 663 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 SLC26A9Q7LBE3 791 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 SMYD4Q8IYR2 804 aaPredicted RBP13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 SLC37A2Q8TED4 501 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 TBCBQ99426 244 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 NCAPGQ9BPX3 1015 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 NUDT9Q9BW91 350 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 PPP4R2Q9NY27 417 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 ATP8A1Q9Y2Q0 1164 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 DNHD1Q96M86 4753 aa13.65□□□□□ -0.22
EXOSC3-207ENST00000490516 HEATR9A2RTY3 570 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 PDE2AO00408 941 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 SLC16A3O15427 465 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 CCNYL3P0C7X3 344 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 HNRNPH3P31942 346 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 GARSP41250 739 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 FASLGP48023 281 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 POLD2P49005 469 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms