RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 ALDH3B2P48448 385 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 HNRNPFP52597 415 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 MRPS22P82650 360 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 ROR1Q01973 937 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 PTK6Q13882 451 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 MOGQ16653 247 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 PRSS55Q6UWB4 352 aaPredicted RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 CYP2U1Q7Z449 544 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 PLD5Q8N7P1 536 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 OVCA2Q8WZ82 227 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 TANKQ92844 425 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 TRMT2BQ96GJ1 504 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 ZNF558Q96NG5 402 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 OLFM1Q99784 485 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 CIB1Q99828 191 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 EPS15L1Q9UBC2 864 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 FBXW11Q9UKB1 542 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 ANGPTL3Q9Y5C1 460 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SHROOM3Q8TF72 1996 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SYCE1LA8MT33 242 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 H6PDO95479 791 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SEC24AO95486 1093 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 KRT1P04264 644 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 INHBBP09529 407 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 ATF2P15336 505 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 HMGA1P17096 107 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 ITIH2P19823 946 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 HCAR3P49019 387 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 FASTKD3Q14CZ7 662 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 LSM12Q3MHD2 195 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 TPGS2Q68CL5 300 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 KYAT3Q6YP21 454 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 GALNT7Q86SF2 657 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 ZC3H7AQ8IWR0 971 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 DEFB107AQ8IZN7 70 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 GLMNQ92990 594 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SGF29Q96ES7 293 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SNF8Q96H20 258 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 CDK5RAP1Q96SZ6 601 aaKnown RBP9.85□□□□□ -0.83
NOD1-208ENST00000489614 CXorf21Q9HAI6 301 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 NEK6Q9HC98 313 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 GMIPQ9P107 970 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 SLC27A5Q9Y2P5 690 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 RNF11Q9Y3C5 154 aa9.85□□□□□ -0.83
NOD1-208ENST00000489614 CROCCQ5TZA2 2017 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 CCDC195A0A1B0GUA6 201 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 H3BMQ9 156 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 HAT1O14929 419 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 TCEA3O75764 348 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 FGBP02675 491 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ITGAVP06756 1048 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 PDIA2Q13087 525 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 OXA1LQ15070 435 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 HADHQ16836 314 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 ATAD3BQ5T9A4 648 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ANKRD26P1Q6NSI1 321 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 NEK5Q6P3R8 708 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 LILRA6Q6PI73 481 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 SYDE1Q6ZW31 735 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 GALNT13Q8IUC8 556 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 HERC6Q8IVU3 1022 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 PCDH19Q8TAB3 1148 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 PDCD6IPQ8WUM4 868 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 PEX13Q92968 403 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 VMP1Q96GC9 406 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 COG8Q96MW5 612 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 RNF157Q96PX1 679 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ALPK1Q96QP1 1244 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 MAGEB5Q9BZ81 275 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 STN1Q9H668 368 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 RPF2Q9H7B2 306 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 AFF4Q9UHB7 1163 aaKnown RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 USTQ9Y2C2 406 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 RWDD3Q9Y3V2 267 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 HOXC11O43248 304 aaPredicted RBP9.84□□□□□ -0.83
NOD1-208ENST00000489614 USP12O75317 370 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 PTGS2P35354 604 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 CPOXP36551 454 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 AQP5P55064 265 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 PSMD5Q16401 504 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 BBS9Q3SYG4 887 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 SNAP47Q5SQN1 464 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 TUBA3EQ6PEY2 450 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 TAC4Q86UU9 113 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 CACTIN-AS1Q8N1I8 211 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 ACMSDQ8TDX5 336 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 FIG4Q92562 907 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 FAM111AQ96PZ2 611 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 SLC29A1Q99808 456 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 LRRC3Q9BY71 257 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 EPS8L2Q9H6S3 715 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 LRRC4Q9HBW1 653 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 KLHL11Q9NVR0 708 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 SPG21Q9NZD8 308 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 WHRNQ9P202 907 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 CHD7Q9P2D1 2997 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 CDH22Q9UJ99 828 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 MYRFQ9Y2G1 1151 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 UGT2A1Q9Y4X1 527 aa9.84□□□□□ -0.83
NOD1-208ENST00000489614 IKBKGQ9Y6K9 419 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms