RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 PATE1Q8WXA2 126 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 NKD1Q969G9 470 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 PMEPA1Q969W9 287 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 CCDC74BQ96LY2 380 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 NSMCE3Q96MG7 304 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 TAAR9Q96RI9 348 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 B3GNT4Q9C0J1 378 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 DONSONQ9NYP3 566 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 TAAR2Q9P1P5 351 aa16.99■□□□□ 0.31
TOP3B-217ENST00000489581 TTC24A2A3L6 582 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 PDE2AO00408 941 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 EEF2KO00418 725 aaKnown RBP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 TRAFD1O14545 582 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 HGSO14964 777 aaPredicted RBP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 CEACAM5P06731 702 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 CD1CP29017 333 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 ATP1A2P50993 1020 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 ARSDP51689 593 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 OGDHQ02218 1023 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 ILF3Q12906 894 aaKnown RBP eCLIP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 BIRC2Q13490 618 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 KRT31Q15323 416 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 SYCP1Q15431 976 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 CA9Q16790 459 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 DENND2CQ68D51 928 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 DCUN1D2Q6PH85 259 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 ZNF438Q7Z4V0 828 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 NUS1Q96E22 293 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 COQ10AQ96MF6 247 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 GSDMCQ9BYG8 508 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 DHX35Q9H5Z1 703 aaKnown RBP16.98■□□□□ 0.31
TOP3B-217ENST00000489581 SP110Q9HB58 689 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 B4GALT6Q9UBX8 382 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 AP4E1Q9UPM8 1137 aa16.98■□□□□ 0.31
TOP3B-217ENST00000489581 DFFAO00273 331 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 DAPK3O43293 454 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 MYCLP1P12525 358 aaPredicted RBP16.97■□□□□ 0.31
TOP3B-217ENST00000489581 MPSTP25325 297 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 HTR7P34969 479 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 GNPDA1P46926 289 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 NSUN2Q08J23 767 aaKnown RBP eCLIP16.97■□□□□ 0.31
TOP3B-217ENST00000489581 NR1D2Q14995 579 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 PPP1R15BQ5SWA1 713 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 FKBP15Q5T1M5 1219 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 NKAIN2Q5VXU1 208 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 BORAQ6PGQ7 559 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 SLC30A9Q6PML9 568 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 HEATR4Q86WZ0 1026 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 ARHGAP12Q8IWW6 846 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 IL22RA1Q8N6P7 574 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 PTCD2Q8WV60 388 aaKnown RBP16.97■□□□□ 0.31
TOP3B-217ENST00000489581 ART4Q93070 314 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 AGPAT1Q99943 283 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 PHPT1Q9NRX4 125 aaPredicted RBP16.97■□□□□ 0.31
TOP3B-217ENST00000489581 SUFUQ9UMX1 484 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 SIK3Q9Y2K2 1263 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 B3GALT1Q9Y5Z6 326 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 FLNCQ14315 2725 aa16.97■□□□□ 0.31
TOP3B-217ENST00000489581 PPM1DO15297 605 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 ZW10O43264 779 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 TPM2P07951 284 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 ERCC2P18074 760 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 UGT1A3P35503 534 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 LIMK2P53671 638 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 CNGA3Q16281 694 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 NAGSQ8N159 534 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 PDCD6IPQ8WUM4 868 aaKnown RBP16.96■□□□□ 0.31
TOP3B-217ENST00000489581 PCMTD1Q96MG8 357 aaPredicted RBP16.96■□□□□ 0.31
TOP3B-217ENST00000489581 TEX101Q9BY14 249 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 FRMD8Q9BZ67 464 aaPredicted RBP16.96■□□□□ 0.31
TOP3B-217ENST00000489581 ADNPQ9H2P0 1102 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 TRNAU1APQ9NX07 287 aaKnown RBP16.96■□□□□ 0.31
TOP3B-217ENST00000489581 PCSK1NQ9UHG2 260 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 PCDHGC4Q9Y5F7 938 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 ST14Q9Y5Y6 855 aa16.96■□□□□ 0.31
TOP3B-217ENST00000489581 GOLGA6CA6NDK9 693 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 GOLGA6BA6NDN3 693 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 GOLGA6DP0CG33 693 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 LIFP15018 202 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 DESP17661 470 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 GPR3P46089 330 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 POLD2P49005 469 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 AP1S1P61966 158 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 CDK3Q00526 305 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 CTBSQ01459 385 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 IL10RBQ08334 325 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 TRA2AQ13595 282 aaKnown RBP eCLIP16.95■□□□□ 0.3
TOP3B-217ENST00000489581 RFTN1Q14699 578 aaPredicted RBP16.95■□□□□ 0.3
TOP3B-217ENST00000489581 CLPPQ16740 277 aaPredicted RBP16.95■□□□□ 0.3
TOP3B-217ENST00000489581 SKIDA1Q1XH10 827 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 ERMARDQ5T6L9 678 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 RFX8Q6ZV50 586 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 TP53INP2Q8IXH6 220 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 MCOLN2Q8IZK6 566 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 CACNA2D3Q8IZS8 1091 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 NPWQ8N729 165 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 AGBL5Q8NDL9 886 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 NEK11Q8NG66 645 aa16.95■□□□□ 0.3
TOP3B-217ENST00000489581 ENOX1Q8TC92 643 aaKnown RBP16.95■□□□□ 0.3
TOP3B-217ENST00000489581 KCTD15Q96SI1 283 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms