RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 RGMBQ6NW40 437 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 MTSS1LQ765P7 747 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 DGLUCYQ7Z3D6 616 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 ADGRG6Q86SQ4 1221 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 GPAT4Q86UL3 456 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 NOXA1Q86UR1 476 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 FOXRED2Q8IWF2 684 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 WDR63Q8IWG1 891 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 CHERPQ8IWX8 916 aaKnown RBP3.33□□□□□ -1.88
CBWD1-216ENST00000489272 SLC24A4Q8NFF2 622 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 BEST2Q8NFU1 509 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 FAM76AQ8TAV0 307 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 SLC20A1Q8WUM9 679 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 STAMQ92783 540 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 EYA3Q99504 573 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 LRRC1Q9BTT6 524 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 TAOK3Q9H2K8 898 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 ESRP2Q9H6T0 727 aaKnown RBP3.33□□□□□ -1.88
CBWD1-216ENST00000489272 IL1RAPL1Q9NZN1 696 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 PEMTQ9UBM1 199 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 PADI1Q9ULC6 663 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 RIPOR2Q9Y4F9 1068 aa3.33□□□□□ -1.88
CBWD1-216ENST00000489272 PDS5AQ29RF7 1337 aaKnown RBP3.33□□□□□ -1.88
CBWD1-216ENST00000489272 A0A1B0GU03 582 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 MMP2P08253 660 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 EDN2P20800 178 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 S1PR1P21453 382 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 RRM1P23921 792 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 HOXC13P31276 330 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 RAD23BP54727 409 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 KRTAP10-1P60331 282 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 KRT24Q2M2I5 525 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 TMEM30BQ3MIR4 351 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 ANKRD54Q6NXT1 300 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 TAOK1Q7L7X3 1001 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 RNF113BQ8IZP6 322 aaKnown RBP3.32□□□□□ -1.88
CBWD1-216ENST00000489272 ENAHQ8N8S7 591 aaPredicted RBP3.32□□□□□ -1.88
CBWD1-216ENST00000489272 TAS1R2Q8TE23 839 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 NOC3LQ8WTT2 800 aaKnown RBP3.32□□□□□ -1.88
CBWD1-216ENST00000489272 COG8Q96MW5 612 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 BBS4Q96RK4 519 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 FKRPQ9H9S5 495 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 MKKSQ9NPJ1 570 aaPredicted RBP3.32□□□□□ -1.88
CBWD1-216ENST00000489272 DDX4Q9NQI0 724 aaKnown RBP3.32□□□□□ -1.88
CBWD1-216ENST00000489272 TMEM30AQ9NV96 361 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 FAM118AQ9NWS6 357 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 KIAA1456Q9P272 454 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.32□□□□□ -1.88
CBWD1-216ENST00000489272 STON1Q9Y6Q2 735 aa3.32□□□□□ -1.88
CBWD1-216ENST00000489272 IGKV3D-15A0A087WSY6 115 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 G6PDP11413 515 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 DDX5P17844 614 aaKnown RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 HOXA1P49639 335 aaPredicted RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 GRIK3Q13003 919 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 KRT72Q14CN4 511 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 TAF5Q15542 800 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 TAF11Q15544 211 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 TCTN1Q2MV58 587 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 EIF2S3LQ2VIR3 472 aaKnown RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 ZNF667Q5HYK9 610 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 PDSS1Q5T2R2 415 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 ZNF772Q68DY9 489 aaPredicted RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 ARHGAP11AQ6P4F7 1023 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 KCTD18Q6PI47 426 aaPredicted RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 KCTD8Q6ZWB6 473 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 LINGO2Q7L985 606 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 TADA2BQ86TJ2 420 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 HERC6Q8IVU3 1022 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 C1orf87Q8N0U7 546 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 SAMD3Q8N6K7 520 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 LSM14AQ8ND56 463 aaKnown RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 DBF4BQ8NFT6 615 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 TNIP2Q8NFZ5 429 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 DUSP19Q8WTR2 217 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 ABTB1Q969K4 478 aaPredicted RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 ALG14Q96F25 216 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 F2RL3Q96RI0 385 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 MPHOSPH6Q99547 160 aaKnown RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 MOV10L1Q9BXT6 1211 aaKnown RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 BPIFA1Q9NP55 256 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 CTNNAL1Q9UBT7 734 aa3.31□□□□□ -1.88
CBWD1-216ENST00000489272 FAF1Q9UNN5 650 aaPredicted RBP3.31□□□□□ -1.88
CBWD1-216ENST00000489272 TMEM202A6NGA9 273 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 CYC1P08574 325 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 AGAP20933 346 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 MAOAP21397 527 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 GRK6P43250 576 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 GPD2P43304 727 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 TERF1P54274 439 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 HNRNPH2P55795 449 aaKnown RBP3.3□□□□□ -1.88
CBWD1-216ENST00000489272 CCNYL2Q5T2Q4 361 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 ANO1Q5XXA6 986 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 ZNF852Q6ZMS4 543 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.3□□□□□ -1.88
CBWD1-216ENST00000489272 SLC35F3Q8IY50 421 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 ZCCHC9Q8N567 271 aaKnown RBP3.3□□□□□ -1.88
CBWD1-216ENST00000489272 MAGEE1Q9HCI5 957 aa3.3□□□□□ -1.88
CBWD1-216ENST00000489272 HCFC1R1Q9NWW0 138 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms