RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SEC14L5O43304 696 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 XPNPEP2O43895 674 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 HNRNPCL1O60812 293 aaKnown RBP3.66□□□□□ -1.82
RFC4-213ENST00000489028 KRT36O76013 467 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 IGKV3-20P01619 116 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 IGLV2-11P01706 119 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 HNRNPCL4P0DMR1 293 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 HLA-DOBP13765 273 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 ECT2LQ008S8 904 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 COL28A1Q2UY09 1125 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SLC45A4Q5BKX6 768 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 UNQ6126/PRO20091Q6UXV3 157 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SLC36A4Q6YBV0 504 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 TUBA1AQ71U36 451 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 TAOK1Q7L7X3 1001 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SLC46A3Q7Z3Q1 461 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 HAPLN4Q86UW8 402 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SMC5Q8IY18 1101 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SMAP1Q8IYB5 467 aaPredicted RBP3.66□□□□□ -1.82
RFC4-213ENST00000489028 CADM4Q8NFZ8 388 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 DUSP19Q8WTR2 217 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SECTM1Q8WVN6 248 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 FIG4Q92562 907 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 RRP36Q96EU6 259 aaKnown RBP3.66□□□□□ -1.82
RFC4-213ENST00000489028 SLC41A2Q96JW4 573 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 NODALQ96S42 347 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 PCYT2Q99447 389 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 KXD1Q9BQD3 176 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 TUBA1CQ9BQE3 449 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 PAIP1Q9H074 479 aaKnown RBP3.66□□□□□ -1.82
RFC4-213ENST00000489028 PPP1R3EQ9H7J1 279 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 EVA1AQ9H8M9 152 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 BRF2Q9HAW0 419 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 SDF2L1Q9HCN8 221 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 CAPN7Q9Y6W3 813 aa3.66□□□□□ -1.82
RFC4-213ENST00000489028 PDS5AQ29RF7 1337 aaKnown RBP3.66□□□□□ -1.82
RFC4-213ENST00000489028 GRID2O43424 1007 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 PLGP00747 810 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 IRF1P10914 325 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 DGKAP23743 735 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 MT3P25713 68 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 EPHA8P29322 1005 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 ABCD1P33897 745 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 PAFAH1B1P43034 410 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 GNAQP50148 359 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 METAP2P50579 478 aaKnown RBP eCLIP3.65□□□□□ -1.83
RFC4-213ENST00000489028 FUT6P51993 359 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 ZNF132P52740 706 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 SORDQ00796 357 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 POU3F1Q03052 451 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 RELQ04864 619 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 NAE1Q13564 534 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 FGFBP1Q14512 234 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 CTF1Q16619 201 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 PLEKHA7Q6IQ23 1121 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 CCNI2Q6ZMN8 369 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 C9orf139Q6ZV77 190 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 ZNF34Q8IZ26 560 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 DSELQ8IZU8 1212 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 CIARTQ8N365 385 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 SPATA6LQ8N4H0 392 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 NFKBIDQ8NI38 313 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 LNX1Q8TBB1 728 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 NOC3LQ8WTT2 800 aaKnown RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 PPP1R13BQ96KQ4 1090 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 INPP4AQ96PE3 977 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 NR1H4Q96RI1 486 aaPredicted RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 FAM110AQ9BQ89 295 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 EIF2AK1Q9BQI3 630 aaKnown RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 H2AFJQ9BTM1 129 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 GPR108Q9NPR9 543 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 HINT3Q9NQE9 182 aaKnown RBP3.65□□□□□ -1.83
RFC4-213ENST00000489028 PCDHB16Q9NRJ7 776 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 TXLNGQ9NUQ3 528 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 ARHGAP26Q9UNA1 814 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 CAMK2AQ9UQM7 478 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 ZNF711Q9Y462 761 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 PCDHAC2Q9Y5I4 1007 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 CGNL1Q0VF96 1302 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 KDM3AQ9Y4C1 1321 aa3.65□□□□□ -1.83
RFC4-213ENST00000489028 CCDC196A0A1B0GTZ2 297 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 PLEKHD1A6NEE1 506 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 A6NLC8 198 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 TGFB1I1O43294 461 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 KRT86O43790 486 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 CDAP32320 146 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 GABRB2P47870 512 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 HARS2P49590 506 aaKnown RBP3.64□□□□□ -1.83
RFC4-213ENST00000489028 HNRNPH2P55795 449 aaKnown RBP3.64□□□□□ -1.83
RFC4-213ENST00000489028 KRT81Q14533 505 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.64□□□□□ -1.83
RFC4-213ENST00000489028 ZNF280DQ6N043 979 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 GFRALQ6UXV0 394 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 TMEM219Q86XT9 240 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 WDR63Q8IWG1 891 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 BBS10Q8TAM1 723 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 SLC20A1Q8WUM9 679 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 CD101Q93033 1021 aa3.64□□□□□ -1.83
RFC4-213ENST00000489028 ZUFSPQ96AP4 578 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms