RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MSTO1Q9BUK6 570 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 HMGXB4Q9UGU5 601 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 FBXO40Q9UH90 709 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 BRCA2P51587 3418 aa16.22■□□□□ 0.19
MCF2L-229ENST00000488765 SYCE1LA8MT33 242 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 TTC34A8MYJ7 566 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 KCNK1O00180 336 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 TIMM44O43615 452 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 TFDP2Q14188 446 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 USP10Q14694 798 aaKnown RBP16.21■□□□□ 0.19
MCF2L-229ENST00000488765 ATAD3CQ5T2N8 411 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 ACMSDQ8TDX5 336 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 TOR4AQ9NXH8 423 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 CD300AQ9UGN4 299 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 DLX3O60479 287 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 ABCB7O75027 752 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 UGT2B11O75310 529 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 LRIG2O94898 1065 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 ALX3O95076 343 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 MAPTP10636 758 aaKnown RBP16.21■□□□□ 0.19
MCF2L-229ENST00000488765 POLR2EP19388 210 aaKnown RBP16.21■□□□□ 0.19
MCF2L-229ENST00000488765 CBLP22681 906 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 CLCNKBP51801 687 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 GJA9P57773 515 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 STX1BP61266 288 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 PRKAA1Q13131 559 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 HEATR6Q6AI08 1181 aaKnown RBP16.21■□□□□ 0.19
MCF2L-229ENST00000488765 LYSMD2Q8IV50 215 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 ZNF221Q9UK13 617 aa16.21■□□□□ 0.19
MCF2L-229ENST00000488765 TSPAN9O75954 239 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 RASAL1O95294 804 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 CYP3A5P20815 502 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 GP2P55259 537 aaKnown RBP16.21■□□□□ 0.18
MCF2L-229ENST00000488765 NLGN4XQ8N0W4 816 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 OR5H6Q8NGV6 325 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 MED30Q96HR3 178 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 FEM1AQ9BSK4 669 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 SMOC2Q9H3U7 446 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 FEM1BQ9UK73 627 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 TESMINQ9Y4I5 508 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 U3KQV3 271 aa16.21■□□□□ 0.18
MCF2L-229ENST00000488765 C12orf71A8MTZ7 269 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 CYP7B1O75881 506 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 CPNE6O95741 557 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 SBK3P0C264 359 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 PSMB4P28070 264 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 HTR2BP41595 481 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 POU6F2P78424 691 aaPredicted RBP16.2■□□□□ 0.18
MCF2L-229ENST00000488765 INPP5AQ14642 412 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 ATP6AP1Q15904 470 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 ZFP69Q49AA0 526 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 Q5BKY6 102 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 XYLT1Q86Y38 959 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 UBE2J2Q8N2K1 259 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 KDM1BQ8NB78 822 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 NXNL1Q96CM4 212 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 RPRD1BQ9NQG5 326 aaKnown RBP16.2■□□□□ 0.18
MCF2L-229ENST00000488765 SNX5Q9Y5X3 404 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 A8MUA0 341 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 H3BMM5 538 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 MTERF2Q49AM1 385 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 FBXO48Q5FWF7 155 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 LIPMQ5VYY2 423 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 ARHGAP17Q68EM7 881 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 SLC41A1Q8IVJ1 513 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 PYROXD2Q8N2H3 581 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 CNIH3Q8TBE1 160 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 EXT2Q93063 718 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 ZNF385DQ9H6B1 395 aa16.2■□□□□ 0.18
MCF2L-229ENST00000488765 TRIM64BA6NI03 449 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 OGTO15294 1046 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 EXTL3O43909 919 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CPNE3O75131 537 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 USP2O75604 605 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 DBTP11182 482 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CRHBPP24387 322 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 PIGAP37287 484 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 KCTD14Q9BQ13 255 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 EHMT1Q9H9B1 1298 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 THG1LQ9NWX6 298 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SATB2Q9UPW6 733 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 A0A1W2PQ72 361 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CENPXA8MT69 81 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 hCG_2039718K7EN88 272 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 M0QYV0 167 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 ARPC2O15144 300 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CCDC159P0C7I6 412 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CNTFP26441 200 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 MPP1Q00013 466 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SYT16Q17RD7 645 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 TKFCQ3LXA3 575 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 CERCAMQ5T4B2 595 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 KDELC2Q7Z4H8 507 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 SYTL5Q8TDW5 730 aaPredicted RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 TXNDC15Q96J42 360 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 MOV10Q9HCE1 1003 aaKnown RBP16.19■□□□□ 0.18
MCF2L-229ENST00000488765 ENTPD7Q9NQZ7 604 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 TMPRSS4Q9NRS4 437 aa16.19■□□□□ 0.18
MCF2L-229ENST00000488765 RNF146Q9NTX7 359 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms