RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 TMEM202A6NGA9 273 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 AGAP14A8MT82 685 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 EIF3CLB5ME19 914 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ITM2AO43736 263 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SLC28A2O43868 658 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 CCNDBP1O95273 360 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 OR2C1O95371 312 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 MMP2P08253 660 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 NAGAP17050 411 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 HOXD13P35453 343 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ARL3P36405 182 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 UBA7P41226 1012 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 GABRB2P47870 512 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ENTPD1P49961 510 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ARF3P61204 181 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ARF1P84077 181 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ZXDBP98169 803 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ITGADQ13349 1161 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 MAMLD1Q13495 774 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 DRAP1Q14919 205 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SHBQ15464 509 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 DPCR1Q3MIW9 517 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 CDONQ4KMG0 1287 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 PAPPA-AS1Q5QFB9 102 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 GKAP1Q5VSY0 366 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ITPRIPL1Q6GPH6 555 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 CFAP161Q6P656 301 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 B3GNT6Q6ZMB0 384 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 FASTKD5Q7L8L6 764 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 PCGF5Q86SE9 256 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 PALB2Q86YC2 1186 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 FOXRED2Q8IWF2 684 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ARHGAP12Q8IWW6 846 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 AADATQ8N5Z0 425 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 BEST2Q8NFU1 509 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 TMEM255BQ8WV15 326 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 TRIB2Q92519 343 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 RND1Q92730 232 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 ARHGEF2Q92974 986 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SMARCE1Q969G3 411 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 FAM149B1Q96BN6 582 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SLC41A2Q96JW4 573 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 C1orf74Q96LT6 269 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 MAP7D2Q96T17 732 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SDF4Q9BRK5 362 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SPRY4Q9C004 299 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 RBM38Q9H0Z9 239 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 EIF2B3Q9NR50 452 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 HCFC1R1Q9NWW0 138 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 FBXO9Q9UK97 447 aaPredicted RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 SRPRBQ9Y5M8 271 aaKnown RBP2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 STON1Q9Y6Q2 735 aa2.93□□□□□ -1.94
R3HDM1-219ENST00000488035 IGHV4-28A0A0C4DH34 117 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 FRMD3A2A2Y4 597 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 DYTNA2CJ06 578 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 A8MZ25 164 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 VCYO14598 125 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 AP3D1O14617 1153 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 HSPA12AO43301 675 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 AHCYL1O43865 530 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 TIPRLO75663 272 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 HOXB5P09067 269 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 MXI1P50539 228 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 NUDT6P53370 316 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 NLRP5P59047 1200 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 HILS1P60008 231 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 BNC1Q01954 994 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 Q0VFX4 171 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 TRAF3Q13114 568 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 OLIG2Q13516 323 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 NAE1Q13564 534 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 IRF3Q14653 427 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 FSCBQ5H9T9 825 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 DNTTIP2Q5QJE6 756 aaKnown RBP2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 OTUD1Q5VV17 481 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 KIAA0930Q6ICG6 404 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 FBXL22Q6P050 247 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 KLHL35Q6PF15 583 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 KLHL24Q6TFL4 600 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 LINGO2Q7L985 606 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 SHFQ7M4L6 423 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 OR14L1PQ8NHC6 308 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 DNASE2BQ8WZ79 361 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 IGSF8Q969P0 613 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 FAM84BQ96KN1 310 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 SLITRK1Q96PX8 696 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 TREX2Q9BQ50 279 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 FAM110AQ9BQ89 295 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 HAUS8Q9BT25 410 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 CENPOQ9BU64 300 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 KRTAP4-3Q9BYR4 195 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 PDZD7Q9H5P4 517 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 SLC28A3Q9HAS3 691 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 RANGRFQ9HD47 186 aaPredicted RBP2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 NOX4Q9NPH5 578 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 GPR108Q9NPR9 543 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 EHD2Q9NZN4 543 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 DLGAP2Q9P1A6 1054 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 SLC9A2Q9UBY0 812 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 TINAGQ9UJW2 476 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms