RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 RAB41Q5JT25 222 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 Q5PR19 223 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 MFSD4BQ5TF39 518 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 KIAA0930Q6ICG6 404 aaPredicted RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 TRILQ7L0X0 811 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 PIP4P1Q86T03 277 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 LSMEM1Q8N8F7 131 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 C16orf52Q8NHV5 167 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 INPP5DQ92835 1189 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 ARHGEF26Q96DR7 871 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 TMEM68Q96MH6 324 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 ZNF570Q96NI8 536 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 GFM1Q96RP9 751 aaKnown RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 MAK16Q9BXY0 300 aaKnown RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 PDZD7Q9H5P4 517 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 CYSLTR2Q9NS75 346 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 DECR2Q9NUI1 292 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 TUBA8Q9NY65 449 aaPredicted RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 NKIRAS2Q9NYR9 191 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 C11orf21Q9P2W6 132 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 TMEM5Q9Y2B1 443 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 NFE2L3Q9Y4A8 694 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 SNX8Q9Y5X2 465 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 SESN1Q9Y6P5 492 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 ZNF518AQ6AHZ1 1483 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 SETD1AO15047 1707 aaKnown RBP5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 KIDINS220Q9ULH0 1771 aa5.11□□□□□ -1.59
PRPF38A-203ENST00000487160 NDUFS3O75489 264 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 SLC25A12O75746 678 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 MTA2O94776 668 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 EPN2O95208 641 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 PGM3O95394 542 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 RB1P06400 928 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 CD38P28907 300 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 AGLP35573 1532 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 KRT20P35900 424 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 ALDH7A1P49419 539 aaKnown RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 CLCN3P51790 818 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 STK4Q13043 487 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 AIMP2Q13155 320 aaKnown RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 NAE1Q13564 534 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 EZH2Q15910 746 aaKnown RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 C2orf68Q2NKX9 166 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 ZSCAN23Q3MJ62 389 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 WASHC2DQ5SRD0 308 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 MANEAQ5SRI9 462 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 PLEKHS1Q5SXH7 462 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 MORN5Q5VZ52 161 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 JADE1Q6IE81 842 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 PARM1Q6UWI2 310 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 CLEC17AQ6ZS10 378 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 TICAM1Q8IUC6 712 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 MB21D2Q8IYB1 491 aaPredicted RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 C1orf131Q8NDD1 294 aaKnown RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 GABPB2Q8TAK5 448 aaPredicted RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 SLITRK1Q96PX8 696 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 NCAPGQ9BPX3 1015 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 ISCUQ9H1K1 167 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 FZD3Q9NPG1 666 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 SUCLA2Q9P2R7 463 aaPredicted RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 FBXL17Q9UF56 701 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 FRMD4BQ9Y2L6 1034 aa5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 CEP170BQ9Y4F5 1589 aaPredicted RBP5.1□□□□□ -1.59
PRPF38A-203ENST00000487160 ALKQ9UM73 1620 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 ARHGAP5Q13017 1502 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PLCH2O75038 1416 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 TRAPPC8Q9Y2L5 1435 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 KRTAP4-8A0A0G2JLE6 195 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 SCAMP1O15126 338 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 FGBP02675 491 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PRF1P14222 555 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 MYF6P23409 242 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PIK3CAP42336 1068 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 MMP13P45452 471 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 GALCP54803 685 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 P2RX3P56373 397 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PSMC6P62333 389 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 SSBP2P81877 361 aaPredicted RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 BECN1Q14457 450 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 SMN1Q16637 294 aaKnown RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 ASTE1Q2TB18 679 aaPredicted RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 USP41Q3LFD5 358 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 C6orf141Q5SZD1 244 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 LCE1DQ5T752 114 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 CRELD2Q6UXH1 353 aaPredicted RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PALB2Q86YC2 1186 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 SFTPA2Q8IWL1 248 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 NANOGP1Q8N7R0 232 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 ZNF548Q8NEK5 533 aaPredicted RBP5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 BEST2Q8NFU1 509 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 OR14L1PQ8NHC6 308 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PIGOQ8TEQ8 1089 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 OTULINQ96BN8 352 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 ELMOD3Q96FG2 381 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PGAM5Q96HS1 289 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 FEM1CQ96JP0 617 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 SLC41A2Q96JW4 573 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 PPP1R13BQ96KQ4 1090 aa5.09□□□□□ -1.59
PRPF38A-203ENST00000487160 FAM110AQ9BQ89 295 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms