RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SUV39H2Q9H5I1 410 aa7.66□□□□□ -1.18
PDPN-205ENST00000487038 SUDS3Q9H7L9 328 aaPredicted RBP7.66□□□□□ -1.18
PDPN-205ENST00000487038 ACP6Q9NPH0 428 aa7.66□□□□□ -1.18
PDPN-205ENST00000487038 PHPT1Q9NRX4 125 aaPredicted RBP7.66□□□□□ -1.18
PDPN-205ENST00000487038 SPATS2LQ9NUQ6 558 aaKnown RBP7.66□□□□□ -1.18
PDPN-205ENST00000487038 KCTD5Q9NXV2 234 aa7.66□□□□□ -1.18
PDPN-205ENST00000487038 OR12D3Q9UGF7 316 aa7.66□□□□□ -1.18
PDPN-205ENST00000487038 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.66□□□□□ -1.18
PDPN-205ENST00000487038 MRPS18BQ9Y676 258 aaKnown RBP7.66□□□□□ -1.18
PDPN-205ENST00000487038 OAS3Q9Y6K5 1087 aaKnown RBP7.66□□□□□ -1.18
PDPN-205ENST00000487038 RPS6KL1Q9Y6S9 549 aa7.66□□□□□ -1.18
PDPN-205ENST00000487038 TACC2O95359 2948 aa7.66□□□□□ -1.18
PDPN-205ENST00000487038 BICDL2A1A5D9 508 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 CDC14CA4D256 554 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 A6NCN8 305 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 A8MU76 341 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 TEX33O43247 280 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 LRCH4O75427 683 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 DLGAP3O95886 979 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 RNF224P0DH78 156 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 NFKBIAP25963 317 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 COL8A1P27658 744 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 TRIM23P36406 574 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 GNPDA1P46926 289 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 FASLGP48023 281 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 POLR2LP62875 67 aaKnown RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 PNOCQ13519 176 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 SNAP47Q5SQN1 464 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 PNCKQ6P2M8 343 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 CYB5D1Q6P9G0 228 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 WDR74Q6RFH5 385 aaPredicted RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 TIPARPQ7Z3E1 657 aaKnown RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 CSMD2Q7Z408 3487 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 NLRP14Q86W24 1093 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 APLFQ8IW19 511 aaPredicted RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 NAGSQ8N159 534 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 TMEM35BQ8NCS4 154 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 PRR7Q8TB68 274 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 SMARCE1Q969G3 411 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 VOPP1Q96AW1 172 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 NUS1Q96E22 293 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 STAMBPL1Q96FJ0 436 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 DHTKD1Q96HY7 919 aaPredicted RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 CFAP57Q96MR6 1250 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 TUBGCP5Q96RT8 1024 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 ULBP3Q9BZM4 244 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 SPRY4Q9C004 299 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 TWSG1Q9GZX9 223 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 ATP13A3Q9H7F0 1226 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 NDFIP2Q9NV92 336 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 DONSONQ9NYP3 566 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 TMEM9Q9P0T7 183 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 MAP10Q9P2G4 905 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 APEX2Q9UBZ4 518 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 HOOK1Q9UJC3 728 aaKnown RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 TLK1Q9UKI8 766 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 PHTF1Q9UMS5 762 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 G3BP2Q9UN86 482 aaKnown RBP7.65□□□□□ -1.18
PDPN-205ENST00000487038 MAP4K5Q9Y4K4 846 aa7.65□□□□□ -1.18
PDPN-205ENST00000487038 SPG11Q96JI7 2443 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 AKAP9Q99996 3911 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 BECN2A8MW95 431 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 K7EM74 188 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 PPM1DO15297 605 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 INSIG1O15503 277 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 SORBS2O94875 1100 aaKnown RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 CLDN1O95832 211 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 RECKO95980 971 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 MT-ND3P03897 115 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 CCNYL3P0C7X3 344 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 POU3F2P20265 443 aaPredicted RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 BMP6P22004 513 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 AK4P27144 223 aaPredicted RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 CASP14P31944 242 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 FLT3P36888 993 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 ACTR1BP42025 376 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 GABRB2P47870 512 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 MARSP56192 900 aaKnown RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 YBEYP58557 167 aaPredicted RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 ACTR1AP61163 376 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 CTBSQ01459 385 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 ACOX1Q15067 660 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 CDO1Q16878 200 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 EIF2S3LQ2VIR3 472 aaKnown RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 PARP15Q460N3 678 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 MANEALQ5VSG8 457 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 C1QL3Q5VWW1 255 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 TRIM65Q6PJ69 517 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 C6orf15Q6UXA7 325 aaPredicted RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 DPPA4Q7L190 304 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 ARCQ7LC44 396 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 LYSMD3Q7Z3D4 306 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 BNIPLQ7Z465 357 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 ARHGAP22Q7Z5H3 698 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 SLC47A2Q86VL8 602 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 NRROSQ86YC3 692 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 HPS6Q86YV9 775 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 TRIM59Q8IWR1 403 aa7.64□□□□□ -1.19
PDPN-205ENST00000487038 SRRM1Q8IYB3 904 aaKnown RBP7.64□□□□□ -1.19
PDPN-205ENST00000487038 PATE1Q8WXA2 126 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms