RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 HMX1Q9NP08 348 aaPredicted RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 MTF2Q9Y483 593 aaPredicted RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 A0A0D9SEW6 157 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 UBFD1O14562 309 aaKnown RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 UBDO15205 165 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 ACSL4O60488 711 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 SMIM24O75264 130 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 NDST3O95803 873 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 LYNP07948 512 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 UBTFL6P0CB48 400 aaPredicted RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 ATF6P18850 670 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 ME2P23368 584 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 SLC6A4P31645 630 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 TIAL1Q01085 375 aaKnown RBP eCLIP18■□□□□ 0.47
PDLIM7-207ENST00000486828 SEMA3AQ14563 771 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 OGFRL1Q5TC84 451 aaPredicted RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 ZFP1Q6P2D0 407 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 PQLC1Q8N2U9 271 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 OR13C4Q8NGS5 318 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 USP13Q92995 863 aaPredicted RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 PTERQ96BW5 349 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 TRIB3Q96RU7 358 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 CDK5RAP1Q96SZ6 601 aaKnown RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 MRPL1Q9BYD6 325 aaKnown RBP18■□□□□ 0.47
PDLIM7-207ENST00000486828 RETREG1Q9H6L5 497 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 CATSPERZQ9NTU4 200 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 HCSTQ9UBK5 93 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 TRAF6Q9Y4K3 522 aa18■□□□□ 0.47
PDLIM7-207ENST00000486828 NBNO60934 754 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 SUPT7LO94864 414 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 AQP4P55087 323 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 HERVK_113P63132 956 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 GNA12Q03113 381 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 UNC50Q53HI1 259 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 ANKS3Q6ZW76 656 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 DBF4BQ8NFT6 615 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 OR4L1Q8NH43 312 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 HMGCLL1Q8TB92 370 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 ERVK-6Q9BXR3 956 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 TRPC7Q9HCX4 862 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 POLR3BQ9NW08 1133 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 SEPT3Q9UH03 358 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 DNMT3LQ9UJW3 386 aa17.99■□□□□ 0.47
PDLIM7-207ENST00000486828 PIRTP0C851 137 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 UQCRBP14927 111 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 ATP5C1P36542 298 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 RPL26P61254 145 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 MS4A2Q01362 244 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 STX5Q13190 355 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 PTK2BQ14289 1009 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 PPP1R3AQ16821 1122 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 TYSND1Q2T9J0 566 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 OR7D4Q8NG98 312 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 OR52K2Q8NGK3 314 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 TMA16Q96EY4 203 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 PDP2Q9P2J9 529 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 CHD5Q8TDI0 1954 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 NT5C1B-RDH14C9J2C7 533 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 STX16-NPEPL1H3BU86 382 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 ARVCFO00192 962 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 PSMD12O00232 456 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 GPC4O75487 556 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 BCAS2O75934 225 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 ZNF37AP17032 561 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 ALDH1A3P47895 512 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 STC1P52823 247 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 CDH4P55283 916 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 FASTKQ14296 549 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 GPNMBQ14956 572 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 IL31Q6EBC2 164 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 DLG3Q92796 817 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 PSKH2Q96QS6 385 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 AARSD1Q9BTE6 412 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 TTPALQ9BTX7 342 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 CINPQ9BW66 212 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 INTS10Q9NVR2 710 aaKnown RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 LRFN2Q9ULH4 789 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 ACTL7AQ9Y615 435 aa17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 ZFP37Q9Y6Q3 630 aaPredicted RBP17.98■□□□□ 0.47
PDLIM7-207ENST00000486828 CCDC189A1A4V9 331 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 TRIM38O00635 465 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 CRTAMO95727 393 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 GALTP07902 379 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 ARSAP15289 507 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 PSMD8P48556 350 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 SLC11A2P49281 568 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 MRPS22P82650 360 aaKnown RBP17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 COL13A1Q5TAT6 717 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 LHX8Q68G74 356 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 CLEC6AQ6EIG7 209 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 FBXO46Q6PJ61 603 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 CYHR1Q6ZMK1 362 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 TAS1R1Q7RTX1 841 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 TMEM126BQ8IUX1 230 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 RNF148Q8N7C7 305 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 BHLHE22Q8NFJ8 381 aaPredicted RBP17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 RHEBL1Q8TAI7 183 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 CDKN2AIPNLQ96HQ2 116 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 ASB2Q96Q27 587 aa17.97■□□□□ 0.47
PDLIM7-207ENST00000486828 TMEM175Q9BSA9 504 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms