RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 TRIT1Q9H3H1 467 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 MOV10Q9HCE1 1003 aaKnown RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 LTB4R2Q9NPC1 389 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 KLHL8Q9P2G9 620 aaPredicted RBP10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PCDHGA3Q9Y5H0 932 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 PMF1-BGLAPU3KQ54 211 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 V9GYQ6 96 aa10.67□□□□□ -0.7
CCDC171-208ENST00000486641 COL2A1P02458 1487 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 ILVBLA1L0T0 632 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 DEAF1O75398 565 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 NADKO95544 446 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 CAPN3P20807 821 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 BDNFP23560 247 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 APLP1P51693 650 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 EFNA5P52803 228 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 GP2P55259 537 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 STX1BP61266 288 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 CTBP1Q13363 440 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 MEP1AQ16819 746 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 KIF19Q2TAC6 998 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 TMEM236Q5W0B7 351 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 EEF1DP3Q658K8 133 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PPP2R2DQ66LE6 453 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF280DQ6N043 979 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PRMT9Q6P2P2 845 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 DENND6AQ8IWF6 608 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 AFAP1L2Q8N4X5 818 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 OR6Q1Q8NGQ2 317 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 ZNF668Q96K58 619 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 MRPL57Q9BQC6 102 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 CLSTN3Q9BQT9 956 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 NIFKQ9BYG3 293 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 CYP3A43Q9HB55 503 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 EML4Q9HC35 981 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 SPON1Q9HCB6 807 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 HPS4Q9NQG7 708 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 FBXO8Q9NRD0 319 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 ANAPC2Q9UJX6 822 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 NDUFAF1Q9Y375 327 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PCDHA9Q9Y5H5 950 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 MAGED1Q9Y5V3 778 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 GOLGB1Q14789 3259 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 A0A1W2PQ67 120 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 C16orf96A6NNT2 1141 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 BBIP1A8MTZ0 92 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 LACTBL1A8MY62 500 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 UBFD1O14562 309 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 B4GALT5O43286 388 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 TCF3P15923 654 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 STMN1P16949 149 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 NAT1P18440 290 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 TSPAN8P19075 237 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PTPN3P26045 913 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 ATP4BP51164 291 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PLK1P53350 603 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 LSM3P62310 102 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 POU5F1BQ06416 359 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 CDC20Q12834 499 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 HIST2H2ACQ16777 129 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 SOWAHAQ2M3V2 549 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 ADPRMQ3LIE5 342 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 KCTD11Q693B1 232 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 JADE1Q6IE81 842 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 LINC00299Q6ZSB3 139 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 C14orf80Q86SX3 495 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 FAM131BQ86XD5 332 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 KIAA2013Q8IYS2 634 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 LEMD2Q8NC56 503 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PIK3C3Q8NEB9 887 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 HDAC2Q92769 488 aaKnown RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 LRRC58Q96CX6 371 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 MLPHQ9BV36 600 aaPredicted RBP10.66□□□□□ -0.7
CCDC171-208ENST00000486641 NTN4Q9HB63 628 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 SLCO3A1Q9UIG8 710 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 PCDHGA8Q9Y5G5 932 aa10.66□□□□□ -0.7
CCDC171-208ENST00000486641 FAM95CA0A1B0GW59 222 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 M0R3G1 203 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 SNPHO15079 494 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 ZBTB24O43167 697 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-208ENST00000486641 MAN1A2O60476 641 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 NDUFS2O75306 463 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 FARP2O94887 1054 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-208ENST00000486641 ENO2P09104 434 aaPredicted RBP10.65□□□□□ -0.7
CCDC171-208ENST00000486641 DNAJB1P25685 340 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 ALDH4A1P30038 563 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 NPY2RP49146 381 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 GSK3BP49841 420 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 ARSFP54793 590 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 FPGSQ05932 587 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 ILF2Q12905 390 aaKnown RBP10.65□□□□□ -0.7
CCDC171-208ENST00000486641 LAMC2Q13753 1193 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 FAM83EQ2M2I3 478 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 CATSPEREQ5SY80 951 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 C6orf141Q5SZD1 244 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 TAF2Q6P1X5 1199 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 MPZL3Q6UWV2 235 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 TAS2R42Q7RTR8 314 aa10.65□□□□□ -0.7
CCDC171-208ENST00000486641 RNF135Q8IUD6 432 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms