RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ANKRD36A6QL64 1941 aa12.47□□□□□ -0.41
HMG20B-211ENST00000486028 C2orf72A6NCS6 295 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 CAPN8A6NHC0 703 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 ANKRD66B4E2M5 251 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 GIPC1O14908 333 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 PMPCBO75439 489 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 PCCBP05166 539 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 ZNF30P17039 623 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 LHCGRP22888 699 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 EPHA8P29322 1005 aaPredicted RBP12.46□□□□□ -0.41
HMG20B-211ENST00000486028 CD68P34810 354 aaPredicted RBP12.46□□□□□ -0.41
HMG20B-211ENST00000486028 TNNT3P45378 269 aaPredicted RBP12.46□□□□□ -0.41
HMG20B-211ENST00000486028 CDK18Q07002 472 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 BNIP3Q12983 259 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 MTM1Q13496 603 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 FZD2Q14332 565 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 PTPRRQ15256 657 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 PCSK7Q16549 785 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 QPCTQ16769 361 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 FAM182AQ5T1J6 154 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 SEL1L2Q5TEA6 688 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 KDELC2Q7Z4H8 507 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 HSD11B1LQ7Z5J1 315 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 TSPAN33Q86UF1 283 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 PARGQ86W56 976 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 GATAD2AQ86YP4 633 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 ZNF567Q8N184 647 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 ATL2Q8NHH9 583 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 SAP25Q8TEE9 199 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 NUS1Q96E22 293 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 FCRL5Q96RD9 977 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 FAM118BQ9BPY3 351 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 APOOQ9BUR5 198 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 C10orf88Q9H8K7 445 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 DNAJC28Q9NX36 388 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 FAM153AQ9UHL3 310 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 RSPH14Q9UHP6 348 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 PCOLCE2Q9UKZ9 415 aa12.46□□□□□ -0.41
HMG20B-211ENST00000486028 KCNN4O15554 427 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 ZSCAN12O43309 604 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 CBFA2T3O75081 653 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 NDST3O95803 873 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 MT-CYBP00156 380 aaPredicted RBP12.45□□□□□ -0.42
HMG20B-211ENST00000486028 EPOP01588 193 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 CSF2P04141 144 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 GM2AP17900 193 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 NFKB1P19838 968 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 HTR1BP28222 390 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 ETV3P41162 512 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 STC1P52823 247 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 WNT3AP56704 352 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 HNRNPKP61978 463 aaKnown RBP eCLIP12.45□□□□□ -0.427e-9■■■■■ 29.2
HMG20B-211ENST00000486028 FOXK2Q01167 660 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 PTSQ03393 145 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 KLF1Q13351 362 aaPredicted RBP12.45□□□□□ -0.42
HMG20B-211ENST00000486028 TRIP6Q15654 476 aaKnown RBP12.45□□□□□ -0.42
HMG20B-211ENST00000486028 LRRC66Q68CR7 880 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 ITPRIPL1Q6GPH6 555 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 PNCKQ6P2M8 343 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 KDM7AQ6ZMT4 941 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 MACC1Q6ZN28 852 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 Q6ZVL8 140 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 NRSN1Q8IZ57 195 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 CCHCR1Q8TD31 782 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
HMG20B-211ENST00000486028 DTD2Q96FN9 168 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 SMIM14Q96QK8 99 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 TRIB3Q96RU7 358 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 LYSMD1Q96S90 227 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 SRPK1Q96SB4 655 aaKnown RBP12.45□□□□□ -0.42
HMG20B-211ENST00000486028 FRMD8P1Q9BZ68 369 aaPredicted RBP12.45□□□□□ -0.42
HMG20B-211ENST00000486028 CARD9Q9H257 536 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 UBP1Q9NZI7 540 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 BTBD3Q9Y2F9 522 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 OR1A2Q9Y585 309 aa12.45□□□□□ -0.42
HMG20B-211ENST00000486028 UQCRHLA0A096LP55 91 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 C1orf232A0A0U1RR37 186 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 SPAARA0A1B0GVQ0 90 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 TCRBV7S2A1N4TA0A589 114 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 NEMP2A6NFY4 417 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 H3BM21 787 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 CACNB4O00305 520 aaPredicted RBP12.44□□□□□ -0.42
HMG20B-211ENST00000486028 PDE2AO00408 941 aaPredicted RBP12.44□□□□□ -0.42
HMG20B-211ENST00000486028 PIAS2O75928 621 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 ANXA9O76027 345 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 UQCRHP07919 91 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 HOXC4P09017 264 aaPredicted RBP12.44□□□□□ -0.42
HMG20B-211ENST00000486028 NME1P15531 152 aaKnown RBP12.44□□□□□ -0.42
HMG20B-211ENST00000486028 JUNDP17535 347 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 KELP23276 732 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 DGKAP23743 735 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 TRIM23P36406 574 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 SIM1P81133 766 aaPredicted RBP12.44□□□□□ -0.42
HMG20B-211ENST00000486028 EIF2B5Q13144 721 aaKnown RBP12.44□□□□□ -0.42
HMG20B-211ENST00000486028 GALNT3Q14435 633 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 PRPSAP1Q14558 356 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 NFATC4Q14934 902 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 ZNF542PQ5EBM4 170 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 ANKRD20A2Q5SQ80 823 aa12.44□□□□□ -0.42
HMG20B-211ENST00000486028 TPRG1LQ5T0D9 272 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms