RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SRP54P61011 504 aaKnown RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 SHC2P98077 582 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ADCY2Q08462 1091 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF211Q13398 564 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 C1orf61Q13536 156 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PRKD1Q15139 912 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PTPRRQ15256 657 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 LRRC66Q68CR7 880 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 RAET1GQ6H3X3 334 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 DARS2Q6PI48 645 aaKnown RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 CRTC1Q6UUV9 634 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 Q6ZVL8 140 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 BBS12Q6ZW61 710 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 HSD11B1LQ7Z5J1 315 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 RBFAQ8N0V3 343 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 LRRC57Q8N9N7 239 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ZNF548Q8NEK5 533 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 CCHCR1Q8TD31 782 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 SCG3Q8WXD2 468 aaKnown RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ADAMTS14Q8WXS8 1223 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 SPOCK2Q92563 424 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 GLMNQ92990 594 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 WDR26Q9H7D7 661 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PHPT1Q9NRX4 125 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 NLGN3Q9NZ94 848 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 KLF15Q9UIH9 416 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 PACSIN2Q9UNF0 486 aaPredicted RBP12.52□□□□□ -0.41
PTCD1-205ENST00000485746 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 CSNK1G3Q9Y6M4 447 aa12.52□□□□□ -0.41
PTCD1-205ENST00000485746 A0A0U1RQJ8 604 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 A0A0U1RQS6 177 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 C1orf232A0A0U1RR37 186 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 F5H423 210 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 APOC4-APOC2K7ER74 178 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 TRIM38O00635 465 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 FZD6O60353 706 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 PMPCBO75439 489 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 RFPL3O75679 317 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 CLDN7O95471 211 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 APOC2P02655 101 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 MMP2P08253 660 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 C1SP09871 688 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 PYGMP11217 842 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 TSHRP16473 764 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 LHCGRP22888 699 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 EIF3EP60228 445 aaKnown RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 CDK18Q07002 472 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 XRCC4Q13426 336 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 GALNT3Q14435 633 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 ELOCQ15369 112 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 TCEA2Q15560 299 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 DEFB133Q30KQ1 61 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 ESRP1Q6NXG1 681 aaKnown RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 KANSL1Q7Z3B3 1105 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 RAB44Q7Z6P3 723 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 CDKL3Q8IVW4 592 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 SPATA22Q8NHS9 363 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 HTR3CQ8WXA8 447 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 ANP32BQ92688 251 aaKnown RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 AP2M1Q96CW1 435 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 DTD2Q96FN9 168 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 IMP4Q96G21 291 aaKnown RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 TEKT5Q96M29 485 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 QKIQ96PU8 341 aaKnown RBP eCLIP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 SMIM14Q96QK8 99 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 MCCC1Q96RQ3 725 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 VAT1Q99536 393 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 TCEAL2Q9H3H9 227 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 SUDS3Q9H7L9 328 aaPredicted RBP12.51□□□□□ -0.41
PTCD1-205ENST00000485746 CAAP1Q9H8G2 361 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 UBP1Q9NZI7 540 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 PKD2L2Q9NZM6 624 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 FAM153AQ9UHL3 310 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 KLK13Q9UKR3 277 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 EFR3BQ9Y2G0 817 aa12.51□□□□□ -0.41
PTCD1-205ENST00000485746 SPTBN4Q9H254 2564 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 CAPN8A6NHC0 703 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 ANKRD66B4E2M5 251 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 K7ESM1 405 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 PRLP01236 227 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 SLC4A1P02730 911 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 CCDC175P0C221 793 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 CDK4P11802 303 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 NFKB1P19838 968 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 RBL1P28749 1068 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 HK3P52790 923 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 KIAA1024LP59773 190 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 PTSQ03393 145 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 IHHQ14623 411 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 NOMO1Q15155 1222 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 QPCTQ16769 361 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 ALG11Q2TAA5 492 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 DHRS13Q6UX07 377 aa12.5□□□□□ -0.41
PTCD1-205ENST00000485746 GKN2Q86XP6 184 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms