RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 OR1A2Q9Y585 309 aa13.41□□□□□ -0.26
SSR1-208ENST00000483409 CACNA1AO00555 2505 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 C1orf232A0A0U1RR37 186 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 SPAARA0A1B0GVQ0 90 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 MED19A0JLT2 244 aaPredicted RBP13.4□□□□□ -0.26
SSR1-208ENST00000483409 GOLGA6CA6NDK9 693 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 GOLGA6BA6NDN3 693 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 ANKRD66B4E2M5 251 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 K7ESM1 405 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 PSMD11O00231 422 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 C1SP09871 688 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 PIRTP0C851 137 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 GOLGA6DP0CG33 693 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 GRK6P43250 576 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 YPEL5P62699 121 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 CDK18Q07002 472 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 MTM1Q13496 603 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 PTK2BQ14289 1009 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 DBX2Q6ZNG2 339 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 RFLNAQ6ZTI6 216 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 Q6ZVL8 140 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 PARGQ86W56 976 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 PELI3Q8N2H9 469 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 CCDC110Q8TBZ0 833 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 RHBDD1Q8TEB9 315 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 ATG4AQ8WYN0 398 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 OXNAD1Q96HP4 312 aaPredicted RBP13.4□□□□□ -0.26
SSR1-208ENST00000483409 FCRL5Q96RD9 977 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
SSR1-208ENST00000483409 GOLGA6AQ9NYA3 693 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 FAM153AQ9UHL3 310 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 CD84Q9UIB8 345 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 TRHDEQ9UKU6 1024 aa13.4□□□□□ -0.26
SSR1-208ENST00000483409 COL5A1P20908 1838 aaPredicted RBP13.4□□□□□ -0.26
SSR1-208ENST00000483409 GOLGA4Q13439 2230 aaKnown RBP13.4□□□□□ -0.26
SSR1-208ENST00000483409 TOR1BO14657 336 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 CBFA2T3O75081 653 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 PIAS2O75928 621 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 CLDN7O95471 211 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 NDST3O95803 873 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 SLC4A1P02730 911 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 ZNF30P17039 623 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 STC1P52823 247 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 WNT3AP56704 352 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 SIM1P81133 766 aaPredicted RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 PTSQ03393 145 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 EIF2B5Q13144 721 aaKnown RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 GSE1Q14687 1217 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 NFATC4Q14934 902 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 TRIP6Q15654 476 aaKnown RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 INAVAQ3KP66 663 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 ANKRD20A2Q5SQ80 823 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 ANKRD20A1Q5TYW2 823 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 ANKRD20A3Q5VUR7 823 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 ESRP1Q6NXG1 681 aaKnown RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 PNCKQ6P2M8 343 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 KDELC1Q6UW63 502 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 MACC1Q6ZN28 852 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 KANSL1Q7Z3B3 1105 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 SLC13A5Q86YT5 568 aaPredicted RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 CBARPQ8N350 705 aaPredicted RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 EID2Q8N6I1 236 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 IPMKQ8NFU5 416 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 UBE2Q2Q8WVN8 375 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 LYSMD1Q96S90 227 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 TLR10Q9BXR5 811 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 GBA3Q9H227 469 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 CARD9Q9H257 536 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 USP29Q9HBJ7 922 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 UCKL1Q9NWZ5 548 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 KLF15Q9UIH9 416 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 DNPEPQ9ULA0 475 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 PNMA8BQ9ULN7 279 aaPredicted RBP13.39□□□□□ -0.27
SSR1-208ENST00000483409 MYLKQ15746 1914 aa13.39□□□□□ -0.27
SSR1-208ENST00000483409 FFAR2O15552 330 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 ZSCAN12O43309 604 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 CSF2P04141 144 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 NME1P15531 152 aaKnown RBP13.38□□□□□ -0.27
SSR1-208ENST00000483409 JUNDP17535 347 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 DGKAP23743 735 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 PSMB4P28070 264 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 HNRNPKP61978 463 aaKnown RBP eCLIP13.38□□□□□ -0.27
SSR1-208ENST00000483409 MPP3Q13368 585 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 CDKN3Q16667 212 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 ITPRIPL1Q6GPH6 555 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 RAET1GQ6H3X3 334 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 ENPP7Q6UWV6 458 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 NYAP1Q6ZVC0 841 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 LYSMD3Q7Z3D4 306 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 TECPR1Q7Z6L1 1165 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 REXO1L1PQ8IX06 675 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 RBFAQ8N0V3 343 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 SLC25A41Q8N5S1 370 aa13.38□□□□□ -0.27
SSR1-208ENST00000483409 FAM71DQ8N9W8 422 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms