RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 HLA-DPA1P20036 260 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 ID4P47928 161 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 GEMP55040 296 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 WNT3AP56704 352 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 PTSQ03393 145 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 PTK2BQ14289 1009 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 P3H1Q32P28 736 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 ZNF569Q5MCW4 686 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 LRRC66Q68CR7 880 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 PTAR1Q7Z6K3 402 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-206ENST00000483376 TSPAN33Q86UF1 283 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 NRSN1Q8IZ57 195 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 SLC35F6Q8N357 371 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 MRGPRX2Q96LB1 330 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 TBATAQ96M53 351 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 MYOCQ99972 504 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 FAM118BQ9BPY3 351 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 GORASP1Q9BQQ3 440 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 TRABDQ9H4I3 376 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 C10orf88Q9H8K7 445 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 IL21RQ9HBE5 538 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
COL2A1-206ENST00000483376 NFKBIL1Q9UBC1 381 aaPredicted RBP16.28■□□□□ 0.2
COL2A1-206ENST00000483376 PYCARDQ9ULZ3 195 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 COQ6Q9Y2Z9 468 aa16.28■□□□□ 0.2
COL2A1-206ENST00000483376 ENC1O14682 589 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 FLRT2O43155 660 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 FGGP02679 453 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 PYGLP06737 847 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 ATXN1LP0C7T5 689 aaKnown RBP16.27■□□□□ 0.2
COL2A1-206ENST00000483376 SEMG2Q02383 582 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 PRPSAP1Q14558 356 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 SUZ12Q15022 739 aaKnown RBP16.27■□□□□ 0.2
COL2A1-206ENST00000483376 ACOX1Q15067 660 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 SHBQ15464 509 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 PARP6Q2NL67 630 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 CCDC70Q6NSX1 233 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 MACC1Q6ZN28 852 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 HSD11B1LQ7Z5J1 315 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 PARGQ86W56 976 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 FAM71DQ8N9W8 422 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 OR2I1PQ8NGU4 316 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 NUS1Q96E22 293 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 TMEM121Q9BTD3 319 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 CDH19Q9H159 772 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 DRG1Q9Y295 367 aaKnown RBP16.27■□□□□ 0.2
COL2A1-206ENST00000483376 LRRK1Q38SD2 2015 aa16.27■□□□□ 0.2
COL2A1-206ENST00000483376 CACNA1AO00555 2505 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 CNOT1A5YKK6 2376 aaKnown RBP16.26■□□□□ 0.19
COL2A1-206ENST00000483376 ADAMTS9Q9P2N4 1935 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 GOLGA6CA6NDK9 693 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 GOLGA6BA6NDN3 693 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 USP27XA6NNY8 438 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 CEP104O60308 925 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 PMPCBO75439 489 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 FGF1P05230 155 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 GOLGA6DP0CG33 693 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 NME1P15531 152 aaKnown RBP16.26■□□□□ 0.19
COL2A1-206ENST00000483376 TSHRP16473 764 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 PSMB4P28070 264 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 EPHA8P29322 1005 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-206ENST00000483376 ADRA1AP35348 466 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 TNNT3P45378 269 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-206ENST00000483376 GDF10P55107 478 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 KIAA1024LP59773 190 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 FZD2Q14332 565 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 GALNT3Q14435 633 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 SLC1A5Q15758 541 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 PCSK7Q16549 785 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 RANBP10Q6VN20 620 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 Q6ZVL8 140 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 KANSL1Q7Z3B3 1105 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 CCDC110Q8TBZ0 833 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 CCHCR1Q8TD31 782 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 SAP25Q8TEE9 199 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 ATG4AQ8WYN0 398 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 NAP1L3Q99457 506 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-206ENST00000483376 C19orf43Q9BQ61 176 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 ARNT2Q9HBZ2 717 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 GOLGA6AQ9NYA3 693 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 HACD3Q9P035 362 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 FEZ2Q9UHY8 353 aaPredicted RBP16.26■□□□□ 0.19
COL2A1-206ENST00000483376 SNX12Q9UMY4 172 aa16.26■□□□□ 0.19
COL2A1-206ENST00000483376 C1orf232A0A0U1RR37 186 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 A8MX80 341 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 CSF2P04141 144 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ATP1A1P05023 1023 aaKnown RBP16.25■□□□□ 0.19
COL2A1-206ENST00000483376 C1SP09871 688 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 HTR1BP28222 390 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 CXCR5P32302 372 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 ETV3P41162 512 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 GRK6P43250 576 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 DCDC1P59894 354 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 PDE1CQ14123 709 aaPredicted RBP16.25■□□□□ 0.19
COL2A1-206ENST00000483376 INPP5AQ14642 412 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 NFATC4Q14934 902 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 LONRF2Q1L5Z9 754 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 INAVAQ3KP66 663 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 UAP1L1Q3KQV9 507 aa16.25■□□□□ 0.19
COL2A1-206ENST00000483376 FAM182AQ5T1J6 154 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms