RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 WDR45BQ5MNZ6 344 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 IZUMO3Q5VZ72 239 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 LAYNQ6UX15 382 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 ZCCHC9Q8N567 271 aaKnown RBP17.84■□□□□ 0.45
CPNE1-224ENST00000483359 CEP112Q8N8E3 955 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 PIGKQ92643 395 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 EID2BQ96D98 161 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 SERAC1Q96JX3 654 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 SLC6A18Q96N87 628 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 DPH5Q9H2P9 285 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 TMEM74BQ9NUR3 256 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 FNDC3AQ9Y2H6 1198 aaKnown RBP17.84■□□□□ 0.45
CPNE1-224ENST00000483359 C10orf142B7Z368 130 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 RAD51BO15315 384 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 ZNF30P17039 623 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 GM2AP17900 193 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 TPSB2P20231 275 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 NBL1P41271 181 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 TPSAB1Q15661 275 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 CCDC6Q16204 474 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 SPDYCQ5MJ68 293 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 Q6ZVL8 140 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 CYP2U1Q7Z449 544 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 PHOX2BQ99453 314 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 ORAI3Q9BRQ5 295 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 LRRC1Q9BTT6 524 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 C1QTNF2Q9BXJ5 285 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 BPIFA1Q9NP55 256 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 TPX2Q9ULW0 747 aaKnown RBP17.84■□□□□ 0.45
CPNE1-224ENST00000483359 ARL5AQ9Y689 179 aa17.84■□□□□ 0.45
CPNE1-224ENST00000483359 CCDC78A2IDD5 438 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 H0Y8X5 98 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 DNALI1O14645 258 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-224ENST00000483359 WNT9AO14904 365 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 CD27P26842 260 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 CLDN2P57739 230 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 SESN2P58004 480 aaPredicted RBP17.83■□□□□ 0.44
CPNE1-224ENST00000483359 SLC7A5Q01650 507 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 SEPT6Q14141 434 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 CERCAMQ5T4B2 595 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 RNASEH2BQ5TBB1 312 aaKnown RBP17.83■□□□□ 0.44
CPNE1-224ENST00000483359 ZNF534Q76KX8 674 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 LRRN4CLQ8ND94 238 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 ARNT2Q9HBZ2 717 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 AASDHPPTQ9NRN7 309 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 SNX24Q9Y343 169 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 BPTFQ12830 3046 aa17.83■□□□□ 0.44
CPNE1-224ENST00000483359 PCCBP05166 539 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 HNRNPA2B1P22626 353 aaKnown RBP17.82■□□□□ 0.44
CPNE1-224ENST00000483359 IVDP26440 423 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 STC1P52823 247 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 PTPRCAPQ14761 206 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 CCDC38Q502W7 563 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 PPIL6Q8IXY8 311 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 SUMF1Q8NBK3 374 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 NUS1Q96E22 293 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 COQ10AQ96MF6 247 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 CASS4Q9NQ75 786 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 MBNL1Q9NR56 388 aaKnown RBP17.82■□□□□ 0.44
CPNE1-224ENST00000483359 LAMA1P25391 3075 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 FAM187AA6NFU0 413 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 AVILO75366 819 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 RPL21P46778 160 aaKnown RBP17.82■□□□□ 0.44
CPNE1-224ENST00000483359 IRF4Q15306 451 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 ALS2CLQ60I27 953 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 NAT8LQ8N9F0 302 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 DNASE2BQ8WZ79 361 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 DTD2Q96FN9 168 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 SNF8Q96H20 258 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 ERP44Q9BS26 406 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 ARRDC1-AS1Q9H2J1 176 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 L2HGDHQ9H9P8 463 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.82■□□□□ 0.442e-16■■■■□ 24.6
CPNE1-224ENST00000483359 HACD3Q9P035 362 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 KCTD3Q9Y597 815 aa17.82■□□□□ 0.44
CPNE1-224ENST00000483359 DNAH14Q0VDD8 3507 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 PSMD11O00231 422 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 MAGEA6P43360 314 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 CRADDP78560 199 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 NHLH1Q02575 133 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 MSLNQ13421 630 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-224ENST00000483359 LRRC14Q15048 493 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 WSCD2Q2TBF2 565 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 TTC30BQ8N4P2 665 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 SCAMP4Q969E2 229 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 KLF6Q99612 283 aaPredicted RBP17.81■□□□□ 0.44
CPNE1-224ENST00000483359 SEMA4AQ9H3S1 761 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 SMOC1Q9H4F8 434 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 TRABDQ9H4I3 376 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 TM9SF3Q9HD45 589 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 PKD2L2Q9NZM6 624 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 PILRBQ9UKJ0 227 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 UTP11Q9Y3A2 253 aaKnown RBP17.81■□□□□ 0.44
CPNE1-224ENST00000483359 SCN8AQ9UQD0 1980 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 GPR179Q6PRD1 2367 aa17.81■□□□□ 0.44
CPNE1-224ENST00000483359 PRAMEF26H0Y7S4 382 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 SEC31AO94979 1220 aaKnown RBP17.8■□□□□ 0.44
CPNE1-224ENST00000483359 AKT2P31751 481 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 IGFALSP35858 605 aa17.8■□□□□ 0.44
CPNE1-224ENST00000483359 ITGA8P53708 1063 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms