RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 PPP1R13BQ96KQ4 1090 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 RPL10LQ96L21 214 aaKnown RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CCDC114Q96M63 670 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 FEM1AQ9BSK4 669 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 MTG2Q9H4K7 406 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 EBF2Q9HAK2 575 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 DDIT4Q9NX09 232 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 ARHGAP20Q9P2F6 1191 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CGGBP1Q9UFW8 167 aaPredicted RBP6.61□□□□□ -1.35
LRCH3-216ENST00000481048 SERGEFQ9UGK8 458 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CYTH4Q9UIA0 394 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 RWDD2AQ9UIY3 292 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 SLC25A13Q9UJS0 675 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 PCDHB10Q9UN67 800 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 TBC1D30Q9Y2I9 924 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 PAXBP1Q9Y5B6 917 aa6.61□□□□□ -1.35
LRCH3-216ENST00000481048 CXorf51AA0A1B0GTR3 108 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PRAMEF26H0Y7S4 382 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PLRG1O43660 514 aaKnown RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 AKAP8O43823 692 aaKnown RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 RFPL3O75679 317 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 FUCA1P04066 466 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 NTRK1P04629 796 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PDGFRAP16234 1089 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 ZNF18P17022 549 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 CKMT2P17540 419 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 ACP1P24666 158 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 EPHA8P29322 1005 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 DRD3P35462 400 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 KRT9P35527 623 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PSMD8P48556 350 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 CDH4P55283 916 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 NXPH1P58417 271 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 E2F1Q01094 437 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SLC6A3Q01959 620 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SLC20A2Q08357 652 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PDCLQ13371 301 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SHBQ15464 509 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 DLG2Q15700 870 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 EXOC3L4Q17RC7 722 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 COL28A1Q2UY09 1125 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 ACCSLQ4AC99 568 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SETMARQ53H47 684 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 HS1BP3Q53T59 392 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 BRMS1LQ5PSV4 323 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SFMBT2Q5VUG0 894 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 CPZQ66K79 652 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 CXorf57Q6NSI4 855 aaKnown RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 FBXL22Q6P050 247 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 DENND1BQ6P3S1 775 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 TRIM65Q6PJ69 517 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 DHRS13Q6UX07 377 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SETD3Q86TU7 594 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 ZSCAN30Q86W11 494 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 DCP2Q8IU60 420 aaKnown RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 DEFB106AQ8N104 65 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SH2D3CQ8N5H7 860 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 TMIEQ8NEW7 156 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PIP4K2CQ8TBX8 421 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 RFFLQ8WZ73 363 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 SHC3Q92529 594 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 CNDP2Q96KP4 475 aaKnown RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 C1orf74Q96LT6 269 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 C8orf49Q96NF6 230 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 RPRD1AQ96P16 312 aaPredicted RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 CPXM1Q96SM3 734 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 GORASP1Q9BQQ3 440 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 RETREG1Q9H6L5 497 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 WDCPQ9H6R7 721 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 PREBQ9HCU5 417 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 APEX2Q9UBZ4 518 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 XPO7Q9UIA9 1087 aaKnown RBP6.6□□□□□ -1.35
LRCH3-216ENST00000481048 HS3ST2Q9Y278 367 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 OR51B4Q9Y5P0 310 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 IGSF10Q6WRI0 2623 aa6.6□□□□□ -1.35
LRCH3-216ENST00000481048 TRBV23OR9-2A0A075B6M9 112 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 C7orf72A4D263 438 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 BECN2A8MW95 431 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 MATN3O15232 486 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 NPHS1O60500 1241 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 PLATP00750 562 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 CALCAP01258 141 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 C8BP07358 591 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 GABRB2P47870 512 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 ACADVLP49748 655 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 STK19P49842 368 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-216ENST00000481048 STX17P56962 302 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 FANCCQ00597 558 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 SLC7A5Q01650 507 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 TAF5Q15542 800 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 ARHGAP44Q17R89 818 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 SOWAHCQ53LP3 525 aaPredicted RBP6.59□□□□□ -1.35
LRCH3-216ENST00000481048 AGBL4Q5VU57 503 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 OR6B2Q6IFH4 312 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 C19orf48Q6RUI8 117 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 OLFML1Q6UWY5 402 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 LAYNQ6UX15 382 aa6.59□□□□□ -1.35
LRCH3-216ENST00000481048 LRRC31Q6UY01 552 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms