RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TBC1D3IA0A087WXS9 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3EA0A087X179 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3KA0A087X1G2 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3FA6NER0 549 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 A8MX80 341 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3LB9A6J9 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PDE2AO00408 941 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 CES2O00748 559 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TRAFD1O14545 582 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 LATO43561 262 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PMPCBO75439 489 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 MT-CYBP00156 380 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 PDHA1P08559 390 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3HP0C7X1 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 ZSCAN5DPP0CG00 497 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 ADRB3P13945 408 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TIMP2P16035 220 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 CTPS1P17812 591 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PSMB4P28070 264 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 CD38P28907 300 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 EPHA8P29322 1005 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 EIF2S3P41091 472 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 ABL2P42684 1182 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 CCR5P51681 352 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 NEK3P51956 506 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TERF1P54274 439 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 ADPRHP54922 357 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 NXPH1P58417 271 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 SFSWAPQ12872 951 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 GRM3Q14832 879 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PTPRRQ15256 657 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TRIP13Q15645 432 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 OASLQ15646 514 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 PIP5KL1Q5T9C9 394 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 FAXCQ5TGI0 409 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 AGBL4Q5VU57 503 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3GQ6DHY5 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 ALG1LQ6GMV1 187 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3CQ6IPX1 549 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TTC27Q6P3X3 843 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 ARHGEF18Q6ZSZ5 1173 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PRPF39Q86UA1 669 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 CREG2Q8IUH2 290 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TBC1D3Q8IZP1 549 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 EID2Q8N6I1 236 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 GLIS1Q8NBF1 620 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 OR2T34Q8NGX1 318 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 KLK6Q92876 244 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 MAGOHBQ96A72 148 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 IMP4Q96G21 291 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 OXNAD1Q96HP4 312 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 CNDP2Q96KP4 475 aaKnown RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 ZNF641Q96N77 438 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 SPATA13Q96N96 652 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 SMIM14Q96QK8 99 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 NAP1L3Q99457 506 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 VAT1Q99536 393 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 HDAC8Q9BY41 377 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 FRMD8P1Q9BZ68 369 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 SLC25A51Q9H1U9 297 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PRORYQ9H606 182 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TRHDEQ9UKU6 1024 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TTC7AQ9ULT0 858 aaPredicted RBP9.1□□□□□ -0.95
VCP-206ENST00000480327 FZD4Q9ULV1 537 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 CHKBQ9Y259 395 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 PCDHGA1Q9Y5H4 931 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 TRPM6Q9BX84 2022 aa9.1□□□□□ -0.95
VCP-206ENST00000480327 ZNF462Q96JM2 2506 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 GOLGA6L10A0A0M3HER8 536 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 A0A0U1RQS6 177 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 CFAP69A5D8W1 941 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 C5orf60A6NFR6 353 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 NEMP1O14524 444 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 DFNA5O60443 496 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 PHF2O75151 1096 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 SOCS5O75159 536 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 RFPL3O75679 317 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 URI1O94763 535 aaPredicted RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 PCDH8O95206 1070 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 PGLSO95336 258 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 METTL18O95568 372 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 LDOC1O95751 146 aaPredicted RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 CPP00450 1065 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 ITGAVP06756 1048 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 ALPIP09923 528 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 CES1P23141 567 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 MAT2AP31153 395 aaKnown RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 COILP38432 576 aaPredicted RBP9.09□□□□□ -0.95
VCP-206ENST00000480327 PAFAH1B1P43034 410 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 RXRGP48443 463 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 EPHB1P54762 984 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 C21orf59P57076 290 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 TAS2R38P59533 333 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 TARDBPQ13148 414 aaKnown RBP eCLIP9.09□□□□□ -0.95
VCP-206ENST00000480327 GALNT3Q14435 633 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 RTP5Q14D33 572 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 UGP2Q16851 508 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 RALGPS1Q5JS13 557 aa9.09□□□□□ -0.95
VCP-206ENST00000480327 ARMC12Q5T9G4 340 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms