RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CHD8Q9HCK8 2581 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 ARID1BQ8NFD5 2236 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-215ENST00000478531 PCNX2A6NKB5 2137 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CFAP69A5D8W1 941 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 ANKRD66B4E2M5 251 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 MAGEC1O60732 1142 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CLDN7O95471 211 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 GM2AP17900 193 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CHRNA4P43681 627 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 RABIFP47224 123 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CCT8P50990 548 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 THOP1P52888 689 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 RPL26P61254 145 aaKnown RBP6.9□□□□□ -1.3
BRCA1-215ENST00000478531 MPP3Q13368 585 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 OLIG2Q13516 323 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 PRPSAP1Q14558 356 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 INPP5AQ14642 412 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 KCTD19Q17RG1 926 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-215ENST00000478531 WSCD2Q2TBF2 565 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 ZNF542PQ5EBM4 170 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 FAXCQ5TGI0 409 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CCDC70Q6NSX1 233 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 KDELC1Q6UW63 502 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 LYSMD3Q7Z3D4 306 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 ABI3BPQ7Z7G0 1075 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 IQCHQ86VS3 1027 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 SPATS2Q86XZ4 545 aaKnown RBP6.9□□□□□ -1.3
BRCA1-215ENST00000478531 PLA2G15Q8NCC3 412 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 SLC35B2Q8TB61 432 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CENPTQ96BT3 561 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 MRGPRX2Q96LB1 330 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 BMFQ96LC9 184 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 LENG8Q96PV6 779 aaPredicted RBP6.9□□□□□ -1.3
BRCA1-215ENST00000478531 FCRL5Q96RD9 977 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 TRIB3Q96RU7 358 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 WDR24Q96S15 920 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 OSBPL9Q96SU4 736 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 APOL2Q9BQE5 337 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 GORASP1Q9BQQ3 440 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 FICDQ9BVA6 458 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 CAAP1Q9H8G2 361 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 RPL26L1Q9UNX3 145 aaKnown RBP6.9□□□□□ -1.3
BRCA1-215ENST00000478531 SHOC2Q9UQ13 582 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 HS3ST3A1Q9Y663 406 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 FRYQ5TBA9 3013 aa6.9□□□□□ -1.3
BRCA1-215ENST00000478531 ZFC3H1O60293 1989 aaKnown RBP6.9□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF106Q9H2Y7 1883 aaKnown RBP6.9□□□□□ -1.31
BRCA1-215ENST00000478531 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 K7ESM1 405 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PGRMC1O00264 195 aaKnown RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SDC3O75056 442 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF189O75820 626 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ANXA9O76027 345 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 NDST3O95803 873 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 C1SP09871 688 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF30P17039 623 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ACTN2P35609 894 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ARRB1P49407 418 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 LIMK1P53667 647 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 GEMP55040 296 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PTSQ03393 145 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 OVGP1Q12889 678 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SIX1Q15475 284 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 TCEA2Q15560 299 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 OASLQ15646 514 aaKnown RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SLC14A2Q15849 920 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SIRPB2Q5JXA9 342 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 TPRG1LQ5T0D9 272 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 RAET1GQ6H3X3 334 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 RFLNAQ6ZTI6 216 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 Q6ZVL8 140 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 GSTA5Q7RTV2 222 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PRUNE1Q86TP1 453 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PELI3Q8N2H9 469 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 CCDC89Q8N998 374 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 COG1Q8WTW3 980 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 MAIP1Q8WWC4 291 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ASB12Q8WXK4 309 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 TADA1Q96BN2 335 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 DTD2Q96FN9 168 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PBKQ96KB5 322 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 COQ10AQ96MF6 247 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ELF4Q99607 663 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 AP1M1Q9BXS5 423 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 FRMD8P1Q9BZ68 369 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 TM7SF3Q9NS93 570 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 DNAAF2Q9NVR5 837 aaKnown RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 DNAJC28Q9NX36 388 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SNX12Q9UMY4 172 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PPIL1Q9Y3C6 166 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF711Q9Y462 761 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 C5orf60A6NFR6 353 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 PSMD11O00231 422 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 SLC30A4O14863 429 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ZNF185O15231 689 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 USP12O75317 370 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 METTL18O95568 372 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 AGTP01019 485 aa6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ATXN1LP0C7T5 689 aaKnown RBP6.89□□□□□ -1.31
BRCA1-215ENST00000478531 ETS1P14921 441 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms