RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CYP4F12Q9HCS2 524 aa14.47□□□□□ -0.09
SMARCE1-209ENST00000478349 GOLGA6CA6NDK9 693 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 GOLGA6BA6NDN3 693 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 TMEM202A6NGA9 273 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 B4DGG1 531 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 HEXIM1O94992 359 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 GOLGA6DP0CG33 693 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 RARAP10276 462 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 SKILP12757 684 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 ZBED6P86452 979 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 NR1I3Q14994 352 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 MAP9Q49MG5 647 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 CCDC122Q5T0U0 273 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 ARHGAP40Q5TG30 622 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 E4F1Q66K89 784 aaPredicted RBP14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 SPECC1LQ69YQ0 1117 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 CCDC81Q6ZN84 652 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 JAMLQ86YT9 394 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 MAP7D3Q8IWC1 876 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 COQ10AQ96MF6 247 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 CMKLR1Q99788 373 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 CDH19Q9H159 772 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 CARS2Q9HA77 564 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 TRNAU1APQ9NX07 287 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 GOLGA6AQ9NYA3 693 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 SEPT10Q9P0V9 454 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 AMACRQ9UHK6 382 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 LUC7L2Q9Y383 392 aaKnown RBP14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 PCDHGC4Q9Y5F7 938 aa14.46□□□□□ -0.09
SMARCE1-209ENST00000478349 LAMA5O15230 3695 aa14.46□□□□□ -0.1
SMARCE1-209ENST00000478349 MAFKO60675 156 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 ZNF30P17039 623 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 CR2P20023 1033 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 AMPD1P23109 780 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 IL1R2P27930 398 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 PDX1P52945 283 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 EPHB1P54762 984 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 CCL7P80098 99 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 SKOR1P84550 965 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 NFKBIBQ15653 356 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 CNGA3Q16281 694 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 TMEM164Q5U3C3 297 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 DENND2CQ68D51 928 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 RAET1GQ6H3X3 334 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 OGFOD3Q6PK18 319 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 HEATR4Q86WZ0 1026 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 SNRNP27Q8WVK2 155 aaKnown RBP14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 DTD2Q96FN9 168 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 SCRN2Q96FV2 425 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 ZNF830Q96NB3 372 aaPredicted RBP14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 NAP1L5Q96NT1 182 aaPredicted RBP14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 NUP85Q9BW27 656 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 THAP2Q9H0W7 228 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 NOD2Q9HC29 1040 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 CPNE5Q9HCH3 593 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 PCDH18Q9HCL0 1135 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 LRIT1Q9P2V4 623 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 DOCK9Q9BZ29 2069 aa14.45□□□□□ -0.1
SMARCE1-209ENST00000478349 CELSR3Q9NYQ7 3312 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 RHPN2P1A8MT19 583 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 A8MX80 341 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 PGLSO95336 258 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 CCNB1P14635 433 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 MX2P20592 715 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 UGT1A5P35504 534 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 UBASH3AP57075 661 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 FANCCQ00597 558 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 CFHR1Q03591 330 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 ITKQ08881 620 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 HLTFQ14527 1009 aaKnown RBP eCLIP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 SPRED1Q7Z699 444 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 RAVER1Q8IY67 606 aaKnown RBP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 Q8N9G6 341 aaPredicted RBP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 PRR11Q96HE9 360 aaPredicted RBP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 MCCC1Q96RQ3 725 aaPredicted RBP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 CCNL2Q96S94 520 aaPredicted RBP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 ZNF670Q9BS34 389 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 TEX101Q9BY14 249 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 TMEM168Q9H0V1 697 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 WDR70Q9NW82 654 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 ACSL6Q9UKU0 697 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 ATXN7L1Q9ULK2 861 aaPredicted RBP14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 LOXL2Q9Y4K0 774 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 PTPRQQ9UMZ3 2332 aa14.44□□□□□ -0.1
SMARCE1-209ENST00000478349 A0A1W2PQM1 296 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 K7ENP7 123 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 NVLO15381 856 aaKnown RBP14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 NOBOXO60393 691 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 CPNE6O95741 557 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 PEX11BO96011 259 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 CYP1A2P05177 515 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 KRT7P08729 469 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 PTMSP20962 102 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 CD82P27701 267 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 ETV3P41162 512 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 GPR1P46091 355 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 CDK3Q00526 305 aa14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 SLC25A11Q02978 314 aaKnown RBP14.43□□□□□ -0.1
SMARCE1-209ENST00000478349 DPTQ07507 201 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms