RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 RGS2P41220 211 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 LHX1P48742 406 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 ZNF157P51786 506 aaPredicted RBP9.78□□□□□ -0.84
CMC1-209ENST00000477739 AAGABQ6PD74 315 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 UGT2A3Q6UWM9 527 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 KBTBD6Q86V97 674 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 HS3ST5Q8IZT8 346 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 PLEKHG4BQ96PX9 1271 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 SEMA3CQ99985 751 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 KATNBL1Q9H079 304 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 MIR1-1HGQ9H1L0 117 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 SPAG4Q9NPE6 437 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 CNOT6Q9ULM6 557 aaKnown RBP9.78□□□□□ -0.84
CMC1-209ENST00000477739 ITGB1P05556 798 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 PRKACGP22612 351 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 DGKQP52824 942 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 SMG8Q8ND04 991 aaKnown RBP9.78□□□□□ -0.84
CMC1-209ENST00000477739 C3orf58Q8NDZ4 430 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 CENPIQ92674 756 aaPredicted RBP9.78□□□□□ -0.84
CMC1-209ENST00000477739 APBB2Q92870 758 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 A8MT66 165 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 CBX4O00257 560 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 TRIM38O00635 465 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 TLR5O60602 858 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 FBXO21O94952 628 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 LRATO95237 230 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 ASLP04424 464 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 OXTRP30559 389 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 TSPY1Q01534 308 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 OCA2Q04671 838 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 FPGSQ05932 587 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.845e-8■■■□□ 15.1
CMC1-209ENST00000477739 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 ZYG11AQ6WRX3 759 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 FRA10AC1Q70Z53 315 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 GALNT10Q86SR1 603 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 ANKRD46Q86W74 232 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 MFSD6LQ8IWD5 586 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 ACMSDQ8TDX5 336 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 NPY6RQ99463 290 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 C17orf80Q9BSJ5 609 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 MIOSQ9NXC5 875 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 LMCD1Q9NZU5 365 aa9.78□□□□□ -0.84
CMC1-209ENST00000477739 RSL24D1Q9UHA3 163 aaKnown RBP9.78□□□□□ -0.84
CMC1-209ENST00000477739 CABYRO75952 493 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TMCC1O94876 653 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 MLNP12872 115 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 KCNE1P15382 129 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 WARSP23381 471 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 PSMA4P25789 261 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 TPP2P29144 1249 aaPredicted RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 PRDX3P30048 256 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 CD52P31358 61 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SLC5A2P31639 672 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 KCNC1P48547 511 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 DAOAP59103 153 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TIGD5Q53EQ6 642 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 LRRC73Q5JTD7 316 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 MARC1Q5VT66 337 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 PKN3Q6P5Z2 889 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 PGAM4Q8N0Y7 254 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SDCCAG3Q96C92 435 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TEKT5Q96M29 485 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 PTPN18Q99952 460 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 GBA3Q9H227 469 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 RCOR3Q9P2K3 495 aaPredicted RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 ATXN10Q9UBB4 475 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 RPL26L1Q9UNX3 145 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 NDUFAF1Q9Y375 327 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 A0A0C4DFX4 3053 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SLC12A8A0AV02 714 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 DHRS12A0PJE2 317 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TRPC5OSA6NMA1 111 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SDHDO14521 159 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 PTGESO14684 152 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 NDUFS3O75489 264 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 DIRAS1O95057 198 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 ZNF182P17025 639 aaPredicted RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 ELK4P28324 431 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SULT2A1Q06520 285 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TSNQ15631 228 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 UGP2Q16851 508 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 ZNF423Q2M1K9 1284 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 UBXN11Q5T124 520 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TMTC4Q5T4D3 741 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 HECTD2Q5U5R9 776 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 PNPT1Q8TCS8 783 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 CASP10Q92851 521 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SMARCD1Q96GM5 515 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 SMAD5Q99717 465 aaKnown RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 KCTD14Q9BQ13 255 aaPredicted RBP9.77□□□□□ -0.85
CMC1-209ENST00000477739 TM6SF2Q9BZW4 377 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 DRC3Q9H069 523 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 AKTIPQ9H8T0 292 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 ZBTB26Q9HCK0 441 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 LATS2Q9NRM7 1088 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 A0A1W2PQH9 124 aa9.77□□□□□ -0.85
CMC1-209ENST00000477739 TCAF2A6NFQ2 919 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms