RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 SMAD6O43541 496 aaKnown RBP13.42□□□□□ -0.26
HDAC7-221ENST00000477203 PEX11AO75192 247 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 RFPL2O75678 378 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 ITGB6P18564 788 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 PLPP4Q5VZY2 271 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 CILP2Q8IUL8 1156 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 APCDD1Q8J025 514 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 PTCD3Q96EY7 689 aaKnown RBP13.42□□□□□ -0.26
HDAC7-221ENST00000477203 RAB3IPQ96QF0 476 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-221ENST00000477203 TTLL2Q9BWV7 592 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 CFAP97Q9P2B7 532 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 SEPT3Q9UH03 358 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 CD3EAPO15446 510 aaKnown RBP13.42□□□□□ -0.26
HDAC7-221ENST00000477203 TGM5O43548 720 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 SIN3BO75182 1162 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 TMCC1O94876 653 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 ABLIM3O94929 683 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 GLP2RO95838 553 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 GNAZP19086 355 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 CSKP41240 450 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 MAPKAPK2P49137 400 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 RASSF2P50749 326 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 CDH4P55283 916 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 YBEYP58557 167 aaPredicted RBP13.42□□□□□ -0.26
HDAC7-221ENST00000477203 ARF5P84085 180 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 DSG1Q02413 1049 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 KPNB1Q14974 876 aaKnown RBP13.42□□□□□ -0.26
HDAC7-221ENST00000477203 RALGPS1Q5JS13 557 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 TMEM207Q6UWW9 146 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 CAMK1DQ8IU85 385 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 WDR60Q8WVS4 1066 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 ESAMQ96AP7 390 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 BTBD10Q9BSF8 475 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 VPS45Q9NRW7 570 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 OXSMQ9NWU1 459 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 VWA7Q9Y334 891 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 LRRC42Q9Y546 428 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 RAI2Q9Y5P3 530 aa13.42□□□□□ -0.26
HDAC7-221ENST00000477203 ATG2BQ96BY7 2078 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 ATP6AP2A0A1C7CYW4 349 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 IQCF5A8MTL0 148 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 ZBTB14O43829 449 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 OR1I1O60431 355 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 CCDC22O60826 627 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 ATP6AP2O75787 350 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 PDE5AO76074 875 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 FGF18O76093 207 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 CXCL14O95715 111 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 SYN1P17600 705 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 MSX2P35548 267 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-221ENST00000477203 PGM1P36871 562 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 DYNC1I2Q13409 638 aaKnown RBP13.41□□□□□ -0.26
HDAC7-221ENST00000477203 CYTH1Q15438 398 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 GAREM2Q75VX8 874 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 LRRC49Q8IUZ0 686 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 BBS7Q8IWZ6 715 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 BBS5Q8N3I7 341 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 TMEM151AQ8N4L1 468 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 MDGA1Q8NFP4 955 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 ZNF398Q8TD17 642 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 CATSPER2Q96P56 530 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 NMRK1Q9NWW6 199 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 BACE2Q9Y5Z0 518 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 AP3B1O00203 1094 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 NVLO15381 856 aaKnown RBP13.41□□□□□ -0.26
HDAC7-221ENST00000477203 GSC2O15499 205 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 TFEBP19484 476 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 GRK2P25098 689 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 MAGEA12P43365 314 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 KPNA1P52294 538 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-221ENST00000477203 RHOAP61586 193 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 GEN1Q17RS7 908 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 INSCQ1MX18 579 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 ZRANB3Q5FWF4 1079 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 OR52E8Q6IFG1 317 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 CXorf57Q6NSI4 855 aaKnown RBP13.41□□□□□ -0.26
HDAC7-221ENST00000477203 TEX26Q8N6G2 289 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 PRKD2Q9BZL6 878 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 PDFQ9HBH1 243 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 UTP6Q9NYH9 597 aaKnown RBP13.41□□□□□ -0.26
HDAC7-221ENST00000477203 FKBPLQ9UIM3 349 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 PLA2G4CQ9UP65 541 aa13.41□□□□□ -0.26
HDAC7-221ENST00000477203 A0A1B0GVM2 712 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 LCHNA4D1U4 455 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 TCAF2A6NFQ2 919 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 PPP6CO00743 305 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 CLDN11O75508 207 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 SIX3O95343 332 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 S1PR4O95977 384 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 HADHAP40939 763 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 MSLNQ13421 630 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 PPM1LQ5SGD2 360 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 SH2D4BQ5SQS7 431 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 TAS2R42Q7RTR8 314 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 DCBLD1Q8N8Z6 715 aa13.4□□□□□ -0.26
HDAC7-221ENST00000477203 C2orf15Q8WU43 125 aaKnown RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 SREK1Q8WXA9 508 aaKnown RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 KLF16Q9BXK1 252 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 ILKAPQ9H0C8 392 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-221ENST00000477203 MAGEH1Q9H213 219 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms