RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ENDOUP21128 410 aaKnown RBP8.41□□□□□ -1.06
VAPB-205ENST00000476395 AKAP5P24588 427 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 DCKP27707 260 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ALDH4A1P30038 563 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ART3Q13508 389 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 AQP6Q13520 282 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 SPCS2Q15005 226 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 KIZQ2M2Z5 673 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ZNF792Q3KQV3 632 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 UBE2UQ5VVX9 321 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 C9orf131Q5VYM1 1079 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ZFP1Q6P2D0 407 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ARHGAP36Q6ZRI8 547 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 CLEC20AQ6ZU45 233 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ARMCX2Q7L311 632 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 LILRB2Q8N423 598 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 PNPLA1Q8N8W4 532 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 CANT1Q8WVQ1 401 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 NUDT5Q9UKK9 219 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 ACAD8Q9UKU7 415 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 AKT3Q9Y243 479 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 DERAQ9Y315 318 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 PCDHGA7Q9Y5G6 932 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 GBF1Q92538 1859 aa8.41□□□□□ -1.06
VAPB-205ENST00000476395 A0A087WXM4 84 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 RGSL1A5PLK6 1076 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 PRSS47A8MTI9 375 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 NOTOA8MTQ0 251 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 C9JVG2 144 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 DLX3O60479 287 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 KCNA5P22460 613 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 S100A1P23297 94 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ELK4P28324 431 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 PSMD8P48556 350 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 HSPA13P48723 471 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 SULT1E1P49888 294 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 BCAT1P54687 386 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 RAD23AP54725 363 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 SLC13A2Q13183 592 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 LRP8Q14114 963 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ZYG11AQ6WRX3 759 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 PPTC7Q8NI37 304 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 STYXQ8WUJ0 223 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 STON2Q8WXE9 905 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ITPKCQ96DU7 683 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 LRCH3Q96II8 777 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 SERPINI1Q99574 410 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 CTRCQ99895 268 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 IL22Q9GZX6 179 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 TP63Q9H3D4 680 aaPredicted RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 NMRAL1Q9HBL8 299 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ZBTB26Q9HCK0 441 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 SCUBE2Q9NQ36 999 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 KLHL3Q9UH77 587 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 MOSPD1Q9UJG1 213 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 GNPTGQ9UJJ9 305 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 COPG1Q9Y678 874 aaKnown RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 MIA3Q5JRA6 1907 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 SNAI1O95863 264 aaPredicted RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 CHEK2O96017 543 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 AHSGP02765 367 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 POLBP06746 335 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 TPH1P17752 444 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 TFEBP19484 476 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 GRIA4P48058 902 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 TUBA4AP68366 448 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 SCAPQ12770 1279 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 RPS27LQ71UM5 84 aaKnown RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 BTN2A1Q7KYR7 527 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 PSTKQ8IV42 348 aaKnown RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 SPATA6LQ8N4H0 392 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 OR6B3Q8NGW1 331 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ZFP90Q8TF47 636 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ZNF669Q96BR6 464 aaPredicted RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 VPS39Q96JC1 886 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 APOL2Q9BQE5 337 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 PLEKHA5Q9HAU0 1116 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 FANCEQ9HB96 536 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 ADARB2Q9NS39 739 aaKnown RBP8.4□□□□□ -1.06
VAPB-205ENST00000476395 VANGL2Q9ULK5 521 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 AURKCQ9UQB9 309 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 PPP2R3BQ9Y5P8 575 aa8.4□□□□□ -1.06
VAPB-205ENST00000476395 COL1A2P08123 1366 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 SMIM28A0A1B0GU29 152 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 GMNNO75496 209 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 ERCC2P18074 760 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 ADCYAP1R1P41586 468 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 C6orf10Q5SRN2 563 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 CNSTQ6PJW8 725 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 C16orf89Q6UX73 402 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 GADL1Q6ZQY3 521 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 CNTN4Q8IWV2 1026 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 SIX6OS1Q8N1H7 587 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 ARL6IP6Q8N6S5 226 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 HTRA1Q92743 480 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 FTHL17Q9BXU8 183 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 ACE2Q9BYF1 805 aaPredicted RBP8.4□□□□□ -1.07
VAPB-205ENST00000476395 ALOXE3Q9BYJ1 711 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 RNF38Q9H0F5 515 aa8.4□□□□□ -1.07
VAPB-205ENST00000476395 NOL6Q9H6R4 1146 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms