RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 ROPN1LQ96C74 230 aa10.59□□□□□ -0.71
ABCF1-205ENST00000475993 FCRL3Q96P31 734 aaPredicted RBP10.59□□□□□ -0.71
ABCF1-205ENST00000475993 ZNF670Q9BS34 389 aa10.59□□□□□ -0.71
ABCF1-205ENST00000475993 ZSCAN5AQ9BUG6 496 aa10.59□□□□□ -0.71
ABCF1-205ENST00000475993 OR2B2Q9GZK3 357 aa10.59□□□□□ -0.71
ABCF1-205ENST00000475993 TASP1Q9H6P5 420 aa10.59□□□□□ -0.71
ABCF1-205ENST00000475993 ABCD2Q9UBJ2 740 aa10.59□□□□□ -0.71
ABCF1-205ENST00000475993 AHDC1Q5TGY3 1603 aaPredicted RBP10.58□□□□□ -0.71
ABCF1-205ENST00000475993 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 A0A1W2PQ72 361 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ERVH48-1M5A8F1 160 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 NME4O00746 187 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MTSS1O43312 755 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 DNAJB5O75953 348 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SEMA3DO95025 777 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 PIGRP01833 764 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 KRT8P05787 483 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SHMT2P34897 504 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SLC26A3P40879 764 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 TCP10Q12799 353 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 POLD3Q15054 466 aaPredicted RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 HIST2H2ACQ16777 129 aaPredicted RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 PAGE2BQ5JRK9 111 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 FAM102AQ5T9C2 384 aaPredicted RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SLFN12LQ6IEE8 588 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MCPH1Q8NEM0 835 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 STYXQ8WUJ0 223 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 RXFP2Q8WXD0 754 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 VPS33AQ96AX1 596 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MFSD3Q96ES6 412 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ZFYVE19Q96K21 471 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 UBXN10Q96LJ8 280 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MCMBPQ9BTE3 642 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MSTO1Q9BUK6 570 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 INTS10Q9NVR2 710 aaKnown RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ACTR3BQ9P1U1 418 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 AP3M1Q9Y2T2 418 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 NOSIPQ9Y314 301 aaKnown RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 TYW5A2RUC4 315 aaKnown RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ISPDA4D126 451 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 FADS2P1A8MWK0 482 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 UBDO15205 165 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MAN1A2O60476 641 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 GPIP06744 558 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 HTR1AP08908 422 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 HSD17B1P14061 328 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 CD19P15391 556 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 CD40LGP29965 261 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SFNP31947 248 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 KRT20P35900 424 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 CASP3P42574 277 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ASPAP45381 313 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 BST2Q10589 180 aaKnown RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SELPLGQ14242 412 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 CA9Q16790 459 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 PPP1R3AQ16821 1122 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 PMF1Q6P1K2 205 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 R3HCC1LQ7Z5L2 792 aaKnown RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ACVR1CQ8NER5 493 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 OR5H6Q8NGV6 325 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 RASSF5Q8WWW0 418 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 HTRA1Q92743 480 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 AGAP2Q99490 1192 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 BCL7BQ9BQE9 202 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 CDCA7Q9BWT1 371 aaPredicted RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MKRN2Q9H000 416 aaKnown RBP10.58□□□□□ -0.72
ABCF1-205ENST00000475993 SYTL2Q9HCH5 934 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 ATP13A2Q9NQ11 1180 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 MAU2Q9Y6X3 613 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 PMF1-BGLAPU3KQ54 211 aa10.58□□□□□ -0.72
ABCF1-205ENST00000475993 A0A0A0MRY4 1105 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 ZNF487B1APH4 448 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 F5H423 210 aaPredicted RBP10.57□□□□□ -0.72
ABCF1-205ENST00000475993 VWA5AO00534 786 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 DLX3O60479 287 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 XYLBO75191 536 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 SCO1O75880 301 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 KCNK2O95069 426 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 GABARAPO95166 117 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 STBD1O95210 358 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 F7P08709 466 aaPredicted RBP10.57□□□□□ -0.72
ABCF1-205ENST00000475993 PDGFRAP16234 1089 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 PKLRP30613 574 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 HAAOP46952 286 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 PPP5CP53041 499 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 TGFB2P61812 414 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 BNIP2Q12982 314 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 SLC13A2Q13183 592 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 DPY19L1Q2PZI1 675 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 HEATR6Q6AI08 1181 aaKnown RBP10.57□□□□□ -0.72
ABCF1-205ENST00000475993 SCARA5Q6ZMJ2 495 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 FBXL6Q8N531 539 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 SPATA13Q96N96 652 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 TM9SF2Q99805 663 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 TMEM246Q9BRR3 403 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 LRRC40Q9H9A6 602 aa10.57□□□□□ -0.72
ABCF1-205ENST00000475993 DDX28Q9NUL7 540 aaKnown RBP10.57□□□□□ -0.72
ABCF1-205ENST00000475993 CPSF3Q9UKF6 684 aaKnown RBP10.57□□□□□ -0.72
ABCF1-205ENST00000475993 ANKRD6Q9Y2G4 727 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms