RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 MTIF3Q9H2K0 278 aaKnown RBP21.78■■□□□ 1.08
CCM2-206ENST00000474617 PNPOQ9NVS9 261 aa21.78■■□□□ 1.08
CCM2-206ENST00000474617 TMCO1Q9UM00 188 aa21.78■■□□□ 1.08
CCM2-206ENST00000474617 PTPRSQ13332 1948 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 TRPC5OSA6NMA1 111 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 IPO13O94829 963 aaKnown RBP21.77■■□□□ 1.08
CCM2-206ENST00000474617 LMNAP02545 664 aaKnown RBP21.77■■□□□ 1.08
CCM2-206ENST00000474617 PYGLP06737 847 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 MZF1P28698 734 aaPredicted RBP21.77■■□□□ 1.08
CCM2-206ENST00000474617 GLRBP48167 497 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 CLCN4P51793 760 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 NAGLUP54802 743 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 CSHL1Q14406 222 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 ARMC12Q5T9G4 340 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 MAB21L3Q8N8X9 362 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 OR13C4Q8NGS5 318 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 ISG20Q96AZ6 181 aaKnown RBP21.77■■□□□ 1.08
CCM2-206ENST00000474617 ABCB8Q9NUT2 735 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 TAS2R13Q9NYV9 303 aa21.77■■□□□ 1.08
CCM2-206ENST00000474617 MARCH4Q9P2E8 410 aaPredicted RBP21.77■■□□□ 1.08
CCM2-206ENST00000474617 AURKAO14965 403 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 STX7O15400 261 aaKnown RBP21.76■■□□□ 1.07
CCM2-206ENST00000474617 SNAP91O60641 907 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 NDUFS3O75489 264 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 HNRNPA1P09651 372 aaKnown RBP eCLIP21.76■■□□□ 1.07
CCM2-206ENST00000474617 CCND1P24385 295 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 ATP6V0D1P61421 351 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 CYP4F8P98187 520 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 DLG1Q12959 904 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 SH2D4BQ5SQS7 431 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 ELMSAN1Q6PJG2 1045 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 CERS6Q6ZMG9 384 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 ACAD11Q709F0 780 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 LONP2Q86WA8 852 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 TEX9Q8N6V9 391 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 ZNF781Q8N8C0 355 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 OR4K2Q8NGD2 314 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 MCUR1Q96AQ8 359 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 NDNQ99608 321 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 TTC1Q99614 292 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 TFB2MQ9H5Q4 396 aaKnown RBP21.76■■□□□ 1.07
CCM2-206ENST00000474617 COG4Q9H9E3 785 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 STK38LQ9Y2H1 464 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 PKP3Q9Y446 797 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 KCTD3Q9Y597 815 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 SPO11Q9Y5K1 396 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 NUMBLQ9Y6R0 609 aa21.76■■□□□ 1.07
CCM2-206ENST00000474617 A0A1W2PQ67 120 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 LEFTY2O00292 366 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 SMIM24O75264 130 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 GJB3O75712 270 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 IGSF6O95976 241 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TCF3P15923 654 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 NUMBP49757 651 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 EPHB1P54762 984 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 PTPN5P54829 565 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 SATB1Q01826 763 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TRAF2Q12933 501 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ZNF789Q5FWF6 425 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ARL13AQ5H913 290 aaPredicted RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 HERVK_113Q902F9 699 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 LPGAT1Q92604 370 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 EXOC2Q96KP1 924 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TUBGCP5Q96RT8 1024 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 EBF4Q9BQW3 602 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 C2orf71A6NGG8 1288 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 MAGEC1O60732 1142 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 DIAPH2O60879 1101 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 PGLSO95336 258 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 PIGNO95427 931 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TPBGLP0DKB5 382 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 PTPN2P17706 415 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TFEBP19484 476 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ARRB2P32121 409 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ALDH18A1P54886 795 aaKnown RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 SULT2A1Q06520 285 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 PDAP1Q13442 181 aaKnown RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 DMC1Q14565 340 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ZNF460Q14592 562 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ZRSR2Q15696 482 aaKnown RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 PDE12Q6L8Q7 609 aaKnown RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 TRIM67Q6ZTA4 783 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 RAB44Q7Z6P3 723 aaPredicted RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 TTC7BQ86TV6 843 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TTC30BQ8N4P2 665 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 NKAPQ8N5F7 415 aaKnown RBP21.75■■□□□ 1.07
CCM2-206ENST00000474617 OTUB2Q96DC9 234 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 L3HYPDHQ96EM0 354 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 MYO19Q96H55 970 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 POMKQ9H5K3 350 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 ATP13A3Q9H7F0 1226 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TCF7L2Q9NQB0 619 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 TBC1D14Q9P2M4 693 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 BAIAP2L1Q9UHR4 511 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 PCDHGC4Q9Y5F7 938 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 SLC4A7Q9Y6M7 1214 aa21.75■■□□□ 1.07
CCM2-206ENST00000474617 GSC2O15499 205 aa21.74■■□□□ 1.07
CCM2-206ENST00000474617 HTRA2O43464 458 aaPredicted RBP21.74■■□□□ 1.07
CCM2-206ENST00000474617 XYLBO75191 536 aa21.74■■□□□ 1.07
CCM2-206ENST00000474617 RB1P06400 928 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms