RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 CAPRIN2Q6IMN6 1127 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 LRRC8EQ6NSJ5 796 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SARM1Q6SZW1 724 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 CCNI2Q6ZMN8 369 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 Q6ZTC4 211 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 MTSS1LQ765P7 747 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 CPLX4Q7Z7G2 160 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 DHX40Q8IX18 779 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 ADSSL1Q8N142 457 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 KCNH5Q8NCM2 988 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 TDRD7Q8NHU6 1098 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 MOAP1Q96BY2 351 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 INTS12Q96CB8 462 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 FAM84BQ96KN1 310 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 FIZ1Q96SL8 496 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 HEMGNQ9BXL5 484 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 PCDH9Q9HC56 1237 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 MKKSQ9NPJ1 570 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC6A13Q9NSD5 602 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 MCM9Q9NXL9 1143 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SMARCAL1Q9NZC9 954 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 LIMA1Q9UHB6 759 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 RCOR1Q9UKL0 485 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 PROCRQ9UNN8 238 aa3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 LSM4Q9Y4Z0 139 aaKnown RBP3.33□□□□□ -1.88
ECHDC1-213ENST00000474240 SCAMP1O15126 338 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC16A5O15375 505 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 ZIC3O60481 467 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 NDUFS3O75489 264 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 BAIAP3O94812 1187 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 TBX18O95935 607 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 SPARCP09486 303 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 ARL3P36405 182 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 CLCNKAP51800 687 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 GAS1P54826 345 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 NAP1L1P55209 391 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 PRAMEP78395 509 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 NAE1Q13564 534 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 FGFBP1Q14512 234 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 ADIPOQQ15848 244 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 CTF1Q16619 201 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 TSTQ16762 297 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 SGO1Q5FBB7 561 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 FAM69BQ5VUD6 431 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 FRG2Q64ET8 278 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF324BQ6AW86 544 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 TMEM154Q6P9G4 183 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 TSSK4Q6SA08 328 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 TAOK1Q7L7X3 1001 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 TDRPQ86YL5 185 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC35F3Q8IY50 421 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 RBMXL3Q8N7X1 1067 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 NUDCD2Q8WVJ2 157 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 PSPC1Q8WXF1 523 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 DNAAF4Q8WXU2 420 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 ERGIC1Q969X5 290 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 PIP5K1AQ99755 562 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 LBHD1Q9BQE6 289 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 SIL1Q9H173 461 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 FBRSL1Q9HCM7 1045 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 HINT3Q9NQE9 182 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 CNGB3Q9NQW8 809 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 CTNNAL1Q9UBT7 734 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 INTS6Q9UL03 887 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 LAS1LQ9Y4W2 734 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 MAU2Q9Y6X3 613 aa3.32□□□□□ -1.88
ECHDC1-213ENST00000474240 C4orf47A7E2U8 309 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC25A12O75746 678 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 PAPSS2O95340 614 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ATP1A3P13637 1013 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 HOXA11P31270 313 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 PIP4K2AP48426 406 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 SORDQ00796 357 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 SNTA1Q13424 505 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 MAMLD1Q13495 774 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 SLC39A14Q15043 492 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 OASLQ15646 514 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ZNF628Q5EBL2 1059 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 SIGIRRQ6IA17 410 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 NCEH1Q6PIU2 408 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 MAATS1Q7Z4T9 603 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 NOXA1Q86UR1 476 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ARHGAP12Q8IWW6 846 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 RNF168Q8IYW5 571 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 FRMD1Q8N878 549 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 TMEM116Q8NCL8 245 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 UCMAQ8WVF2 138 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 TMED6Q8WW62 240 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ARHGEF2Q92974 986 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ARHGEF26Q96DR7 871 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 BICD1Q96G01 975 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ADGRG7Q96K78 797 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 TIGD1Q96MW7 591 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 NCAPGQ9BPX3 1015 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 UBA5Q9GZZ9 404 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 NDST4Q9H3R1 872 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 MUC13Q9H3R2 512 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 ESRP2Q9H6T0 727 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 LTB4R2Q9NPC1 389 aa3.31□□□□□ -1.88
ECHDC1-213ENST00000474240 GPR108Q9NPR9 543 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms