RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 NFATC4Q14934 902 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 PTPRRQ15256 657 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 TPRG1LQ5T0D9 272 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 FAM182AQ5T1J6 154 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 LRRC66Q68CR7 880 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 PNCKQ6P2M8 343 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 DARS2Q6PI48 645 aaKnown RBP14.23□□□□□ -0.13
VAMP4-203ENST00000474047 CRTC1Q6UUV9 634 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 HID1Q8IV36 788 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 PHACTR4Q8IZ21 702 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 SLC25A45Q8N413 288 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 PLA2G15Q8NCC3 412 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 LMX1AQ8TE12 382 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 HTR3CQ8WXA8 447 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 ALG3Q92685 438 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 IMP4Q96G21 291 aaKnown RBP14.23□□□□□ -0.13
VAMP4-203ENST00000474047 TEKT5Q96M29 485 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 COQ10AQ96MF6 247 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 QKIQ96PU8 341 aaKnown RBP eCLIP14.23□□□□□ -0.13
VAMP4-203ENST00000474047 VAT1Q99536 393 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 KLQ9UEF7 1012 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 APOBEC3BQ9UH17 382 aaKnown RBP14.23□□□□□ -0.13
VAMP4-203ENST00000474047 MOSPD1Q9UJG1 213 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
VAMP4-203ENST00000474047 CAPN8A6NHC0 703 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 ANKRD66B4E2M5 251 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 PDE2AO00408 941 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 AQP9O43315 295 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 PMPCBO75439 489 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 STK10O94804 968 aaKnown RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 MMP2P08253 660 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 LHCGRP22888 699 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 PTPN7P35236 360 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 EIF3EP60228 445 aaKnown RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 DAB2P98082 770 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 OTUD4Q01804 1114 aaKnown RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 EIF2B5Q13144 721 aaKnown RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 IHHQ14623 411 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 PRRT3Q5FWE3 981 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 Q6ZVL8 140 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 KANSL1Q7Z3B3 1105 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 SLCO6A1Q86UG4 719 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 CDKL3Q8IVW4 592 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 CHCHD4Q8N4Q1 142 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 ZNF548Q8NEK5 533 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 ACTL9Q8TC94 416 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 CCHCR1Q8TD31 782 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 WDR92Q96MX6 357 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 WDR26Q9H7D7 661 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 LZTFL1Q9NQ48 299 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 PHPT1Q9NRX4 125 aaPredicted RBP14.22□□□□□ -0.13
VAMP4-203ENST00000474047 EVA1BQ9NVM1 165 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 CAPN6Q9Y6Q1 641 aa14.22□□□□□ -0.13
VAMP4-203ENST00000474047 A0A0U1RQS6 177 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 C1orf232A0A0U1RR37 186 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 SCAMP1O15126 338 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 SIGLEC6O43699 453 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 HYAL3O43820 417 aaPredicted RBP14.21□□□□□ -0.13
VAMP4-203ENST00000474047 RASGRP1O95267 797 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 PRLP01236 227 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 TSHRP16473 764 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 CDK18Q07002 472 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 GALNT3Q14435 633 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 NOMO1Q15155 1222 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 RAET1GQ6H3X3 334 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 ESRP1Q6NXG1 681 aaKnown RBP14.21□□□□□ -0.13
VAMP4-203ENST00000474047 AADACL2Q6P093 401 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 RBFAQ8N0V3 343 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 OR4C6Q8NH72 309 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 SPATA22Q8NHS9 363 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 TSACCQ96A04 125 aaPredicted RBP14.21□□□□□ -0.13
VAMP4-203ENST00000474047 DTD2Q96FN9 168 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 ALS2CR12Q96Q35 445 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 SMIM14Q96QK8 99 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 DUSP23Q9BVJ7 150 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 NLGN3Q9NZ94 848 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 UBP1Q9NZI7 540 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 CD84Q9UIB8 345 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 TRHDEQ9UKU6 1024 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 CSNK1G3Q9Y6M4 447 aa14.21□□□□□ -0.13
VAMP4-203ENST00000474047 F5H423 210 aaPredicted RBP14.21□□□□□ -0.14
VAMP4-203ENST00000474047 TRIM38O00635 465 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 CLDN7O95471 211 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 MT-CYBP00156 380 aaPredicted RBP14.21□□□□□ -0.14
VAMP4-203ENST00000474047 TNFP01375 233 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 ANXA6P08133 673 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 CKMT2P17540 419 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 GM2AP17900 193 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 NFKB1P19838 968 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 SPINK2P20155 84 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 RBL1P28749 1068 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 GPR1P46091 355 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 SRP54P61011 504 aaKnown RBP14.21□□□□□ -0.14
VAMP4-203ENST00000474047 WASHC5Q12768 1159 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 DNAJC3Q13217 504 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 C1orf61Q13536 156 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 QPCTQ16769 361 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 SEL1L2Q5TEA6 688 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 ZNF567Q8N184 647 aa14.21□□□□□ -0.14
VAMP4-203ENST00000474047 TTC13Q8NBP0 860 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms