RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PFN3P60673 137 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 IHHQ14623 411 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 INPP5AQ14642 412 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 TSPAN33Q86UF1 283 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 FAM71DQ8N9W8 422 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 CCDC110Q8TBZ0 833 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 RHBDD1Q8TEB9 315 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 PBKQ96KB5 322 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 COQ10AQ96MF6 247 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 LYSMD1Q96S90 227 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 NAP1L3Q99457 506 aaPredicted RBP13.76□□□□□ -0.21
USF1-205ENST00000473969 TMEM121Q9BTD3 319 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 APOOQ9BUR5 198 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 HOMER3Q9NSC5 361 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 PKD2L2Q9NZM6 624 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 R3HDM2Q9Y2K5 976 aaKnown RBP13.76□□□□□ -0.21
USF1-205ENST00000473969 PLXNA2O75051 1894 aa13.76□□□□□ -0.21
USF1-205ENST00000473969 SPTY2D1-AS1A0A0U1RR47 76 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 LIASO43766 372 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 SH3BP5O60239 455 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 CLDN7O95471 211 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 EPOP01588 193 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 PYGLP06737 847 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 CD59P13987 128 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 CXCR5P32302 372 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 ETV3P41162 512 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 GRK6P43250 576 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 BLKP51451 505 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 NOVA1P51513 510 aaKnown RBP13.75□□□□□ -0.21
USF1-205ENST00000473969 HNRNPKP61978 463 aaKnown RBP eCLIP13.75□□□□□ -0.21
USF1-205ENST00000473969 RAET1GQ6H3X3 334 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 PNCKQ6P2M8 343 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 ENPP7Q6UWV6 458 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 HSD11B1LQ7Z5J1 315 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 PARGQ86W56 976 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 NAXDQ8IW45 347 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 RAVER1Q8IY67 606 aaKnown RBP13.75□□□□□ -0.21
USF1-205ENST00000473969 NRSN1Q8IZ57 195 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 SLC35F6Q8N357 371 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 DEFB124Q8NES8 71 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 SLC35B2Q8TB61 432 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 BTN2A2Q8WVV5 523 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 C1orf54Q8WWF1 131 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 TADA1Q96BN2 335 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 DTD2Q96FN9 168 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 GPR63Q9BZJ6 419 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 WDR26Q9H7D7 661 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 ZFYVE1Q9HBF4 777 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 USP29Q9HBJ7 922 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 MAGEE1Q9HCI5 957 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 ZKSCAN5Q9Y2L8 839 aa13.75□□□□□ -0.21
USF1-205ENST00000473969 PCDH15Q96QU1 1955 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 NEMP2A6NFY4 417 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 TM4SF5O14894 197 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PSMD3O43242 534 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 GCATO75600 419 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 IFNB1P01574 187 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 SLC4A1P02730 911 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 CEACAM1P13688 526 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 TSHRP16473 764 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PSMB4P28070 264 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 EPHA8P29322 1005 aaPredicted RBP13.74□□□□□ -0.21
USF1-205ENST00000473969 GPR1P46091 355 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 STC1P52823 247 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PPARDQ03181 441 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PTSQ03393 145 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 SNX1Q13596 522 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 FZD2Q14332 565 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 NFATC4Q14934 902 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PTPRRQ15256 657 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 CCNG2Q16589 344 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PARP6Q2NL67 630 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 P3H1Q32P28 736 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 ZNF542PQ5EBM4 170 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PPM1JQ5JR12 505 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 FAXCQ5TGI0 409 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PSAPL1Q6NUJ1 521 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 ESRP1Q6NXG1 681 aaKnown RBP13.74□□□□□ -0.21
USF1-205ENST00000473969 KDELC1Q6UW63 502 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 MACC1Q6ZN28 852 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 Q6ZVL8 140 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 GSTA5Q7RTV2 222 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 SLC22A18ASQ8N1D0 253 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 SLC25A41Q8N5S1 370 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 ATG4AQ8WYN0 398 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 AP2M1Q96CW1 435 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 OXNAD1Q96HP4 312 aaPredicted RBP13.74□□□□□ -0.21
USF1-205ENST00000473969 TRIB3Q96RU7 358 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 CDC6Q99741 560 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 SLC13A1Q9BZW2 595 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 TRABDQ9H4I3 376 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 PHPT1Q9NRX4 125 aaPredicted RBP13.74□□□□□ -0.21
USF1-205ENST00000473969 RAD18Q9NS91 495 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 HACD3Q9P035 362 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 SHOC2Q9UQ13 582 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 OR1A2Q9Y585 309 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 WDR87Q6ZQQ6 2873 aa13.74□□□□□ -0.21
USF1-205ENST00000473969 ANKRD36A6QL64 1941 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms