RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 NOL4O94818 638 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 PTTG1O95997 202 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CEACAM5P06731 702 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 BPIP17213 487 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TRAPPC10P48553 1259 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 NPY2RP49146 381 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CLCN7P51798 805 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CLCNKBP51801 687 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 COPAP53621 1224 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 RCAN1P53805 252 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 EPHB1P54762 984 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC12A2P55011 1212 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 AP1S2P56377 157 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TNFAIP2Q03169 654 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TOP3AQ13472 1001 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 DNASE1L3Q13609 305 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CTTNQ14247 550 aaKnown RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 RAB39AQ14964 217 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 FAM209BQ5JX69 171 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CACHD1Q5VU97 1274 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 RNF219Q5W0B1 726 aaPredicted RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF544Q6NX49 715 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 PIK3AP1Q6ZUJ8 805 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC22A16Q86VW1 577 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 MICU3Q86XE3 530 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 KIF18BQ86Y91 864 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ZC3H7AQ8IWR0 971 aaKnown RBP5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 CPNE9Q8IYJ1 553 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 TBC1D21Q8IYX1 336 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 IGSF1Q8N6C5 1336 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 RCBTB1Q8NDN9 531 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 RFFLQ8WZ73 363 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 UBE2FQ969M7 185 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 RIPOR3Q96MK2 946 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 MOGAT1Q96PD6 335 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 ASB2Q96Q27 587 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 KIFC1Q9BW19 673 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 BRD9Q9H8M2 597 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 SEMA3GQ9NS98 782 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 GPRC5BQ9NZH0 403 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 STOML2Q9UJZ1 356 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 KCNJ14Q9UNX9 436 aa5.16□□□□□ -1.58
TMEM39A-206ENST00000473684 UTYO14607 1347 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF98A6NK75 572 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 H3BS24 57 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 NDUFS2O75306 463 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ALDH1A2O94788 518 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 NDST3O95803 873 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 CKMP06732 381 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 HOXB7P09629 217 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PAMP19021 973 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TYK2P29597 1187 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 HTR2BP41595 481 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 EIF3EP60228 445 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ERVK-21P61565 698 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PPATQ06203 517 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ILF2Q12905 390 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 BNIP2Q12982 314 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ALX1Q15699 326 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 AGAP6Q5VW22 663 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TATDN1Q6P1N9 297 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ARSKQ6UWY0 536 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 USP50Q70EL3 339 aaPredicted RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF767PQ75MW2 155 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 DDX53Q86TM3 631 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PALM2Q8IXS6 379 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ADGRF2Q8IZF7 708 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ZCCHC7Q8N3Z6 543 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 LEMD2Q8NC56 503 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 VANGL1Q8TAA9 524 aaPredicted RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 TEX47Q8TBZ9 253 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SLC9A6Q92581 669 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 MARC2Q969Z3 335 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 AGAP4Q96P64 663 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SERPINI1Q99574 410 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 YTHDF1Q9BYJ9 559 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 DHX33Q9H6R0 707 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PRDM8Q9NQV8 689 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 C20orf96Q9NUD7 363 aaPredicted RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 AP5S1Q9NUS5 200 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ZSWIM5Q9P217 1185 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 EIF3KQ9UBQ5 218 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 FETUBQ9UGM5 382 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 DPP7Q9UHL4 492 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SNX8Q9Y5X2 465 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 FPGT-TNNI3KV9GXZ4 949 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 EDC4Q6P2E9 1401 aaKnown RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 RTL9Q8NET4 1388 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ANKRD63C9JTQ0 380 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF213O14771 459 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 RAD51BO15315 384 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PTP4A3O75365 173 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 CALB1P05937 261 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SFTPCP11686 197 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ZNF26P17031 533 aaPredicted RBP5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 ADRA1DP25100 572 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 NDST1P52848 882 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 PRKAA2P54646 552 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 BFSP1Q12934 665 aa5.15□□□□□ -1.58
TMEM39A-206ENST00000473684 SEMA3AQ14563 771 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms