RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 LRP4O75096 1905 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 A1L4Q6 167 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PRR19A6NJB7 356 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 A8MX80 341 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 B4DGG1 531 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PPM1DO15297 605 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 NKX2-8O15522 239 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 NUDT21O43809 227 aaKnown RBP9.35□□□□□ -0.91
VCL-204ENST00000472585 KRT38O76015 456 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 FGFR1OPO95684 399 aaKnown RBP9.35□□□□□ -0.91
VCL-204ENST00000472585 IGSF6O95976 241 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PRKAR1AP10644 381 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 MPSTP25325 297 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 HTR1BP28222 390 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 ETFBP38117 255 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PTPN9P43378 593 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 MLLT10P55197 1068 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 GEMIN4P57678 1058 aaKnown RBP9.35□□□□□ -0.91
VCL-204ENST00000472585 BPIFB4P59827 614 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 FMO1Q01740 532 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 MTM1Q13496 603 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 RAPGEF1Q13905 1077 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PTPRRQ15256 657 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 CAMK4Q16566 473 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 HSP90AA4PQ58FG1 418 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 SPECC1LQ69YQ0 1117 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 WDR59Q6PJI9 974 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 LIPIQ6XZB0 460 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 ZNF438Q7Z4V0 828 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PIM3Q86V86 326 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 RTL3Q8N8U3 475 aaKnown RBP9.35□□□□□ -0.91
VCL-204ENST00000472585 CCDC112Q8NEF3 446 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 OR56A4Q8NGH8 313 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 FAM172AQ8WUF8 416 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 KIAA1143Q96AT1 154 aaPredicted RBP9.35□□□□□ -0.91
VCL-204ENST00000472585 TBC1D31Q96DN5 1066 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PDCL3Q9H2J4 239 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 NDST4Q9H3R1 872 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 DPEP2Q9H4A9 486 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 RETREG1Q9H6L5 497 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 CYP4F12Q9HCS2 524 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 OCIAD1Q9NX40 245 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 HPCAL4Q9UM19 191 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 PLEKHM1Q9Y4G2 1056 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 B3GALT1Q9Y5Z6 326 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 ITPR3Q14573 2671 aa9.35□□□□□ -0.91
VCL-204ENST00000472585 ARHGEF17Q96PE2 2063 aaPredicted RBP9.35□□□□□ -0.91
VCL-204ENST00000472585 TCRBV5S1A1TA0A578 114 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 TTC24A2A3L6 582 aaPredicted RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 EFCAB7A8K855 629 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 WASH4PA8MWX3 477 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 F8VZ95 297 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 K7EM74 188 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 TRAFD1O14545 582 aaPredicted RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 ZW10O43264 779 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 DUX1O43812 170 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 ECEL1O95672 775 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 CPNE6O95741 557 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 LSM8O95777 96 aaKnown RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 HOXC4P09017 264 aaPredicted RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 UCHL3P15374 230 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 GNLYP22749 145 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 ELAVL4P26378 380 aaKnown RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 AK4P27144 223 aaPredicted RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 ALDH4A1P30038 563 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 UGT1A3P35503 534 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 MTIF2P46199 727 aaKnown RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 UQCRFS1P47985 274 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 POLD2P49005 469 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 KLK7P49862 253 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 KIAA1024LP59773 190 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 ELP6Q0PNE2 266 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 NR1D2Q14995 579 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 DEFB109BQ30KR1 87 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 VWA3BQ502W6 1294 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 AFMIDQ63HM1 303 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 STRADAQ7RTN6 431 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 TP53INP2Q8IXH6 220 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 NAGSQ8N159 534 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 UMODL1-AS1Q8N2C9 162 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 CBARPQ8N350 705 aaPredicted RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 TSEN2Q8NCE0 465 aaKnown RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 ATL2Q8NHH9 583 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 CASKIN2Q8WXE0 1202 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 NTAN1Q96AB6 310 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 ECHDC3Q96DC8 303 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 SLC45A3Q96JT2 553 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 CCDC74BQ96LY2 380 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 C11orf70Q9BRQ4 267 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 EFHD1Q9BUP0 239 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 LRRC19Q9H756 370 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 GPN2Q9H9Y4 310 aaPredicted RBP9.34□□□□□ -0.91
VCL-204ENST00000472585 TMEM51Q9NW97 253 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 ATP8A1Q9Y2Q0 1164 aa9.34□□□□□ -0.91
VCL-204ENST00000472585 A0A0U1RQS6 177 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 ZSCAN5CA6NGD5 496 aaPredicted RBP9.33□□□□□ -0.92
VCL-204ENST00000472585 TNFRSF10CO14798 259 aa9.33□□□□□ -0.92
VCL-204ENST00000472585 HGSO14964 777 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms