RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ANTXRLA6NF34 631 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 BCAT2O15382 392 aaPredicted RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 DDX5P17844 614 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 EDN2P20800 178 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 GNL1P36915 607 aaPredicted RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 EIF2S3P41091 472 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 SLC12A1Q13621 1099 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 FCN2Q15485 313 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 TCTN1Q2MV58 587 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 FBXO47Q5MNV8 452 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 WDR45BQ5MNZ6 344 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 CPLX2Q6PUV4 134 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 LINGO2Q7L985 606 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 TMTC1Q8IUR5 882 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 SUGP1Q8IWZ8 645 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 RNF113BQ8IZP6 322 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 ZCCHC9Q8N567 271 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 C11orf65Q8NCR3 313 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 SLC20A1Q8WUM9 679 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 RUFY2Q8WXA3 655 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 ABTB1Q969K4 478 aaPredicted RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 BBS4Q96RK4 519 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 PYM1Q9BRP8 204 aaKnown RBP4.57□□□□□ -1.68
CD46-213ENST00000471987 FKRPQ9H9S5 495 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 MAGEE1Q9HCI5 957 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 CTNNAL1Q9UBT7 734 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 PADI1Q9ULC6 663 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 MMP24Q9Y5R2 645 aa4.57□□□□□ -1.68
CD46-213ENST00000471987 GOLGA6L10A0A0M3HER8 536 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 MT-CYBP00156 380 aaPredicted RBP4.56□□□□□ -1.68
CD46-213ENST00000471987 HEXAP06865 529 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 G6PDP11413 515 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 FGF5P12034 268 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 S1PR1P21453 382 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 LINC01547P58512 204 aaPredicted RBP4.56□□□□□ -1.68
CD46-213ENST00000471987 GRIK3Q13003 919 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 HIST2H2ACQ16777 129 aaPredicted RBP4.56□□□□□ -1.68
CD46-213ENST00000471987 TAF15Q92804 592 aaKnown RBP eCLIP4.56□□□□□ -1.68
CD46-213ENST00000471987 ZNF501Q96CX3 271 aaPredicted RBP4.56□□□□□ -1.68
CD46-213ENST00000471987 LRRC1Q9BTT6 524 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 RBM4Q9BWF3 364 aaKnown RBP4.56□□□□□ -1.68
CD46-213ENST00000471987 BPIFA1Q9NP55 256 aa4.56□□□□□ -1.68
CD46-213ENST00000471987 DDX43Q9NXZ2 648 aaKnown RBP4.56□□□□□ -1.68
CD46-213ENST00000471987 TMEM202A6NGA9 273 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 TEX22C9J3V5 150 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 ITGA2P17301 1181 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 HNRNPH2P55795 449 aaKnown RBP4.55□□□□□ -1.68
CD46-213ENST00000471987 EFNB1P98172 346 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 PMP22Q01453 160 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 SREBF2Q12772 1141 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 SGO1Q5FBB7 561 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 MAP3K21Q5TCX8 1036 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 KCTD18Q6PI47 426 aaPredicted RBP4.55□□□□□ -1.68
CD46-213ENST00000471987 C1orf87Q8N0U7 546 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 SLC24A4Q8NFF2 622 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 TBC1D20Q96BZ9 403 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 SH3GL2Q99962 352 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 PHF7Q9BWX1 381 aaPredicted RBP4.55□□□□□ -1.68
CD46-213ENST00000471987 BARHL1Q9BZE3 327 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 ITM2CQ9NQX7 267 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 FBXO9Q9UK97 447 aaPredicted RBP4.55□□□□□ -1.68
CD46-213ENST00000471987 FAM96BQ9Y3D0 163 aa4.55□□□□□ -1.68
CD46-213ENST00000471987 DVL1O14640 695 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 GUCY1B2O75343 617 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 CYC1P08574 325 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 MAOAP21397 527 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 TRAPPC10P48553 1259 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 METAP2P50579 478 aaKnown RBP eCLIP4.54□□□□□ -1.68
CD46-213ENST00000471987 NR0B1P51843 470 aaKnown RBP4.54□□□□□ -1.68
CD46-213ENST00000471987 TERF1P54274 439 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 DVL1P1P54792 670 aaPredicted RBP4.54□□□□□ -1.68
CD46-213ENST00000471987 EIF2S3LQ2VIR3 472 aaKnown RBP4.54□□□□□ -1.68
CD46-213ENST00000471987 TMEM30BQ3MIR4 351 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 C14orf177Q52M58 125 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 PDSS1Q5T2R2 415 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 METTL2BQ6P1Q9 378 aaKnown RBP4.54□□□□□ -1.68
CD46-213ENST00000471987 SLC35F3Q8IY50 421 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 PLD5Q8N7P1 536 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 SPATA5Q8NB90 893 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 FAM76AQ8TAV0 307 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 DUSP19Q8WTR2 217 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 ELP4Q96EB1 424 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 METTL2AQ96IZ6 378 aaKnown RBP4.54□□□□□ -1.68
CD46-213ENST00000471987 ZNF583Q96ND8 569 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 FAM118AQ9NWS6 357 aa4.54□□□□□ -1.68
CD46-213ENST00000471987 LSM4Q9Y4Z0 139 aaKnown RBP4.54□□□□□ -1.68
CD46-213ENST00000471987 GALTP07902 379 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 DDIT3P35638 169 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 HOXA1P49639 335 aaPredicted RBP4.53□□□□□ -1.68
CD46-213ENST00000471987 TAF6P49848 677 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 EEF1A1P68104 462 aaKnown RBP4.53□□□□□ -1.68
CD46-213ENST00000471987 PDE1BQ01064 536 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 CCNYL2Q5T2Q4 361 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 GPATCH4Q5T3I0 446 aaKnown RBP4.53□□□□□ -1.68
CD46-213ENST00000471987 EEF1A1P5Q5VTE0 462 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 ATG16L1Q676U5 607 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 TMEM81Q6P7N7 255 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 KCTD8Q6ZWB6 473 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 ZNF34Q8IZ26 560 aa4.53□□□□□ -1.68
CD46-213ENST00000471987 ZBTB2Q8N680 514 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms