RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 TMEM248Q9NWD8 314 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 EGFL7Q9UHF1 273 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 LRFN2Q9ULH4 789 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 TRPC5OSA6NMA1 111 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 F5H5T6 163 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 BNIP3LO60238 219 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 OR1I1O60431 355 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 CRCPO75575 148 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 CA8P35219 290 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 CLCN5P51795 746 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 ATN1P54259 1190 aaPredicted RBP17.85■□□□□ 0.45
MCF2L-221ENST00000469415 PRKAA2P54646 552 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 CCL23P55773 120 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 YBX1P67809 324 aaKnown RBP17.85■□□□□ 0.45
MCF2L-221ENST00000469415 SH3BP2P78314 561 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 TRIM71Q2Q1W2 868 aaKnown RBP17.85■□□□□ 0.45
MCF2L-221ENST00000469415 IL23RQ5VWK5 629 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 PAQR3Q6TCH7 311 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 DCUN1D1Q96GG9 259 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 COMMD10Q9Y6G5 202 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 TBKBP1A7MCY6 615 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 OR6B1O95007 311 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 DSC1Q08554 894 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 SERINC3Q13530 473 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 VPS26BQ4G0F5 336 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 PIGGQ5H8A4 983 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 AFMIDQ63HM1 303 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 DEFB128Q7Z7B8 93 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 PCSK9Q8NBP7 692 aaKnown RBP17.85■□□□□ 0.45
MCF2L-221ENST00000469415 VPS45Q9NRW7 570 aa17.85■□□□□ 0.45
MCF2L-221ENST00000469415 TDRD15B5MCY1 1934 aaKnown RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 LIN7AO14910 233 aaPredicted RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 DNAJB2P25686 324 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 AGTR2P50052 363 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 CSRP3P50461 194 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 KPNA2P52292 529 aaKnown RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 GRB7Q14451 532 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 MAP3K21Q5TCX8 1036 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 MSANTD2Q6P1R3 559 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 ZNF683Q8IZ20 524 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 NUDT8Q8WV74 236 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 JADE3Q92613 823 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 TUBGCP3Q96CW5 907 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 PCDHB7Q9Y5E2 793 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 SNX13Q9Y5W8 968 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 NYNRINQ9P2P1 1898 aaKnown RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 CDC7O00311 574 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 SERPINF2P08697 491 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 RBP1P09455 135 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 PRDX3P30048 256 aaKnown RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 OR1D2P34982 312 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 NDST2P52849 883 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 PFKPQ01813 784 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 ZNF33AQ06730 810 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 FRG1Q14331 258 aaKnown RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 PDK3Q15120 406 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 TLR1Q15399 786 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 TSNQ15631 228 aaKnown RBP17.84■□□□□ 0.45
MCF2L-221ENST00000469415 TAF12Q16514 161 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 WBP2Q969T9 261 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 GSTO2Q9H4Y5 243 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 IKZF3Q9UKT9 509 aa17.84■□□□□ 0.45
MCF2L-221ENST00000469415 MYLKQ15746 1914 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 FBP2O00757 339 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 MRASO14807 208 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 SNAP91O60641 907 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 RNASEH2AO75792 299 aaKnown RBP17.83■□□□□ 0.45
MCF2L-221ENST00000469415 SRP72O76094 671 aaKnown RBP17.83■□□□□ 0.45
MCF2L-221ENST00000469415 UQCRBP14927 111 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 TWF1Q12792 350 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 RPS6KA2Q15349 733 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 TRIP4Q15650 581 aaPredicted RBP17.83■□□□□ 0.45
MCF2L-221ENST00000469415 UNC50Q53HI1 259 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 CCSAPQ6IQ19 270 aaPredicted RBP17.83■□□□□ 0.45
MCF2L-221ENST00000469415 OR4L1Q8NH43 312 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 CD99L2Q8TCZ2 262 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 CNDP1Q96KN2 507 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 C1orf74Q96LT6 269 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 ACOX2Q99424 681 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 CCDC68Q9H2F9 335 aa17.83■□□□□ 0.45
MCF2L-221ENST00000469415 ARHGEF37A1IGU5 675 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 PIP5K1BO14986 540 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 SLC7A2P52569 658 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 SREBF2Q12772 1141 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 REP15Q6BDI9 236 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 FUT10Q6P4F1 479 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 PGAM4Q8N0Y7 254 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 TSPAN17Q96FV3 270 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 CDK15Q96Q40 435 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 UPF3AQ9H1J1 476 aaKnown RBP17.83■□□□□ 0.44
MCF2L-221ENST00000469415 EML4Q9HC35 981 aaKnown RBP17.83■□□□□ 0.44
MCF2L-221ENST00000469415 ATP13A1Q9HD20 1204 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 CATSPERZQ9NTU4 200 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 PSMD13Q9UNM6 376 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 AURKCQ9UQB9 309 aa17.83■□□□□ 0.44
MCF2L-221ENST00000469415 PRORSD1PA6NEY8 169 aa17.82■□□□□ 0.44
MCF2L-221ENST00000469415 FAM155AB1AL88 458 aaPredicted RBP17.82■□□□□ 0.44
MCF2L-221ENST00000469415 SLCO1B7G3V0H7 640 aa17.82■□□□□ 0.44
MCF2L-221ENST00000469415 IGHA2P01877 340 aa17.82■□□□□ 0.44
MCF2L-221ENST00000469415 SPATA31D3P0C874 917 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms