RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 PRSS38A1L453 326 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 CFAP69A5D8W1 941 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 LRRC10BA6NIK2 292 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 LGALS16A8MUM7 142 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 WISP1O95388 367 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ECEL1O95672 775 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 CEACAM5P06731 702 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 LIPCP11150 499 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ATP1A3P13637 1013 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 TCF4P15884 667 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 PNLIPP16233 465 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
HDAC3-204ENST00000469207 AMPD1P23109 780 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 MIPP30301 263 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ETV3P41162 512 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 IL10RBQ08334 325 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 NSUN2Q08J23 767 aaKnown RBP eCLIP12.28□□□□□ -0.44
HDAC3-204ENST00000469207 CNGA3Q16281 694 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 TBR1Q16650 682 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 MANEAQ5SRI9 462 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 HSD11B1LQ7Z5J1 315 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 PGBD5Q8N414 524 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 GPBAR1Q8TDU6 330 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 COQ10AQ96MF6 247 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ERGIC2Q96RQ1 377 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 CMKLR1Q99788 373 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ARHGAP9Q9BRR9 750 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 WDR26Q9H7D7 661 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ACSL6Q9UKU0 697 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 TMEM191CA6NGB0 347 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 TNFRSF10CO14798 259 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 PPM1DO15297 605 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 NUDT21O43809 227 aaKnown RBP12.27□□□□□ -0.45
HDAC3-204ENST00000469207 PEX11BO96011 259 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 HOXC4P09017 264 aaPredicted RBP12.27□□□□□ -0.45
HDAC3-204ENST00000469207 CCNB1P14635 433 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 IL1R2P27930 398 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 GNPDA1P46926 289 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 MAXP61244 160 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 POLR2LP62875 67 aaKnown RBP12.27□□□□□ -0.45
HDAC3-204ENST00000469207 LBRQ14739 615 aaKnown RBP12.27□□□□□ -0.45
HDAC3-204ENST00000469207 NCAPHQ15003 741 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 PLEKHA7Q6IQ23 1121 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 SLC30A9Q6PML9 568 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 Q6ZVL8 140 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 TSPAN33Q86UF1 283 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 PIM3Q86V86 326 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 HEATR4Q86WZ0 1026 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 DTX1Q86Y01 620 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 CBARPQ8N350 705 aaPredicted RBP12.27□□□□□ -0.45
HDAC3-204ENST00000469207 ZDHHC1Q8WTX9 485 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 NUS1Q96E22 293 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 FAM117AQ9C073 453 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 NOD2Q9HC29 1040 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 PARVAQ9NVD7 372 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 TAAR2Q9P1P5 351 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 CD84Q9UIB8 345 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 TMEM98Q9Y2Y6 226 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 PCDHGA4Q9Y5G9 962 aa12.27□□□□□ -0.45
HDAC3-204ENST00000469207 MYO18BQ8IUG5 2567 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 GOLGA6CA6NDK9 693 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 GOLGA6BA6NDN3 693 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 RHPN2P1A8MT19 583 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 GOLGA6DP0CG33 693 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 FGF3P11487 239 aaPredicted RBP12.26□□□□□ -0.45
HDAC3-204ENST00000469207 MYCLP1P12525 358 aaPredicted RBP12.26□□□□□ -0.45
HDAC3-204ENST00000469207 FERP16591 822 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 CTPS1P17812 591 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 LHCGRP22888 699 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 KELP23276 732 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 CD1CP29017 333 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 CTBSQ01459 385 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 TRAF2Q12933 501 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 DPYSQ14117 519 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 CLCA4Q14CN2 919 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 MAP9Q49MG5 647 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 E4F1Q66K89 784 aaPredicted RBP12.26□□□□□ -0.45
HDAC3-204ENST00000469207 DOK6Q6PKX4 331 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
HDAC3-204ENST00000469207 C17orf82Q86X59 251 aaPredicted RBP12.26□□□□□ -0.45
HDAC3-204ENST00000469207 NAGSQ8N159 534 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 FNIP1Q8TF40 1166 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 PSKH2Q96QS6 385 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 HAUS4Q9H6D7 363 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 GOLGA6AQ9NYA3 693 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 TMEM9Q9P0T7 183 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 MYO1AQ9UBC5 1043 aa12.26□□□□□ -0.45
HDAC3-204ENST00000469207 NPIPB15A6NHN6 443 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 LRRC53A6NM62 1247 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 HTRA2O43464 458 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 PRPSAP2O60256 369 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 LRCH4O75427 683 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 RNF8O76064 485 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 HEXIM1O94992 359 aaKnown RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 CPNE6O95741 557 aa12.25□□□□□ -0.45
HDAC3-204ENST00000469207 FTLP02792 175 aaPredicted RBP12.25□□□□□ -0.45
HDAC3-204ENST00000469207 PDHA1P08559 390 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms