RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 PPP1R3EQ9H7J1 279 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 MMP25Q9NPA2 562 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 GPR108Q9NPR9 543 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 HINT3Q9NQE9 182 aaKnown RBP5.39□□□□□ -1.55
XRN1-207ENST00000468894 ASAH2Q9NR71 780 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 ZNF224Q9NZL3 707 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 ABI3Q9P2A4 366 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 MALT1Q9UDY8 824 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 UTYO14607 1347 aa5.39□□□□□ -1.55
XRN1-207ENST00000468894 EME2A4GXA9 379 aaPredicted RBP5.38□□□□□ -1.55
XRN1-207ENST00000468894 PRSS44E7EML9 344 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 J3KRW8 73 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 SLC16A5O15375 505 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 SEC14L2O76054 403 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 TBX18O95935 607 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 PIP4K2AP48426 406 aaPredicted RBP5.38□□□□□ -1.55
XRN1-207ENST00000468894 METAP2P50579 478 aaKnown RBP eCLIP5.38□□□□□ -1.55
XRN1-207ENST00000468894 GAS1P54826 345 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 MPP1Q00013 466 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 ZNF155Q12901 538 aaPredicted RBP5.38□□□□□ -1.55
XRN1-207ENST00000468894 CCDC70Q6NSX1 233 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 SPSB3Q6PJ21 355 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 TAOK1Q7L7X3 1001 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 WDR63Q8IWG1 891 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 CHERPQ8IWX8 916 aaKnown RBP5.38□□□□□ -1.55
XRN1-207ENST00000468894 SPATA6LQ8N4H0 392 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 OR2AK2Q8NG84 335 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 KCNG4Q8TDN1 519 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 PERPQ96FX8 193 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 BICD1Q96G01 975 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 IGSF21Q96ID5 467 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 PPP1R13BQ96KQ4 1090 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 C3orf30Q96M34 536 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 STRA6Q9BX79 667 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 C1QTNF5Q9BXJ0 243 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 PRKRIP1Q9H875 184 aaPredicted RBP5.38□□□□□ -1.55
XRN1-207ENST00000468894 ZNF556Q9HAH1 456 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 KIF9Q9HAQ2 790 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 SMARCAL1Q9NZC9 954 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 SIX4Q9UIU6 781 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 ERVK-11Q9UQG0 969 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 CEPT1Q9Y6K0 416 aa5.38□□□□□ -1.55
XRN1-207ENST00000468894 ATXN2Q99700 1313 aaKnown RBP5.38□□□□□ -1.55
XRN1-207ENST00000468894 RFPL2O75678 378 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 RTN3O95197 1032 aaPredicted RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 KRT9P35527 623 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 RAD23BP54727 409 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 SEC61BP60468 96 aaKnown RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 RPL7AP62424 266 aaKnown RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 OLR1P78380 273 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 POU5F1BQ06416 359 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 TMEM115Q12893 351 aaPredicted RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 TBCEQ15813 527 aaPredicted RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 USP41Q3LFD5 358 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 CXorf66Q5JRM2 361 aaPredicted RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 C6orf141Q5SZD1 244 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 SLC36A4Q6YBV0 504 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 PQLC2Q6ZP29 291 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 CERS3Q8IU89 383 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 DIS3L2Q8IYB7 885 aaKnown RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 WFIKKN2Q8TEU8 576 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 TANKQ92844 425 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 EVI5LQ96CN4 794 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 LMLNQ96KR4 655 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 DOCK7Q96N67 2140 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 ZNF385AQ96PM9 386 aaKnown RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 IFIH1Q9BYX4 1025 aaKnown RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 RANBP17Q9H2T7 1088 aaKnown RBP5.37□□□□□ -1.55
XRN1-207ENST00000468894 NDST4Q9H3R1 872 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 HAO1Q9UJM8 370 aa5.37□□□□□ -1.55
XRN1-207ENST00000468894 A0A1W2PQF6 199 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 B4E171 279 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 PRR23D1E9PI22 279 aaPredicted RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 MID1O15344 667 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 PAGE4O60829 102 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 CD4P01730 458 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 CLEC3BP05452 202 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 SNRNP70P08621 437 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 PRR23D2P0DMB1 279 aaPredicted RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 SRCP12931 536 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 DDX5P17844 614 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 DDIT3P35638 169 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 TSPAN7P41732 249 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 RARSP54136 660 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 ERVFC1-1P60608 527 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 DCTN2Q13561 401 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 TNFAIP1Q13829 316 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 DRAP1Q14919 205 aaPredicted RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 CTF1Q16619 201 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 METTL2BQ6P1Q9 378 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 INTS12Q96CB8 462 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 METTL2AQ96IZ6 378 aaKnown RBP5.36□□□□□ -1.55
XRN1-207ENST00000468894 DUX5Q96PT3 197 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 TMEM47Q9BQJ4 181 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 PSAT1Q9Y617 370 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 NOTCH4Q99466 2003 aa5.36□□□□□ -1.55
XRN1-207ENST00000468894 SAA2-SAA4A0A096LPE2 208 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 MAGEA13PA6NCF6 341 aa5.35□□□□□ -1.55
XRN1-207ENST00000468894 VCYO14598 125 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms