RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 NME1P15531 152 aaKnown RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 ZFXP17010 805 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 DGKAP23743 735 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 PEX5P50542 639 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 IFI35P80217 286 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 FOXC1Q12948 553 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 EIF2B5Q13144 721 aaKnown RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 LRRC14Q15048 493 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 C11orf91Q3C1V1 193 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 ZFYVE27Q5T4F4 411 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 KDM7AQ6ZMT4 941 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 PTAR1Q7Z6K3 402 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 CCDC13Q8IYE1 715 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 KATNAL2Q8IYT4 538 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 CNTD1Q8N815 330 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 SCRN2Q96FV2 425 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 LGMNQ99538 433 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 BAG1Q99933 345 aaPredicted RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 SEMA3CQ99985 751 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 ANP32EQ9BTT0 268 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 BRD8Q9H0E9 1235 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 RBM22Q9NW64 420 aaKnown RBP eCLIP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 KLF15Q9UIH9 416 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 APOBEC2Q9Y235 224 aaKnown RBP11.19□□□□□ -0.62
COL4A6-205ENST00000468338 DUSP10Q9Y6W6 482 aa11.19□□□□□ -0.62
COL4A6-205ENST00000468338 RECQL5O94762 991 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-205ENST00000468338 RECKO95980 971 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PRLP01236 227 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 HLA-DQB2P05538 268 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PDHA1P08559 390 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 TRIM23P36406 574 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PTGIRP43119 386 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 NR2C2P49116 596 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 VAV2P52735 878 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 HNRNPKP61978 463 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL4A6-205ENST00000468338 SEMG2Q02383 582 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 ADCY2Q08462 1091 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 NIPAL4Q0D2K0 466 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PDE1CQ14123 709 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PDK1Q15118 436 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 IRF4Q15306 451 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 ARMC12Q5T9G4 340 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 SPOCD1Q6ZMY3 1216 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PARGQ86W56 976 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 RCOR2Q8IZ40 523 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 ALDH16A1Q8IZ83 802 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 EXD1Q8NHP7 514 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-205ENST00000468338 TBATAQ96M53 351 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 COQ10AQ96MF6 247 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 SCNM1Q9BWG6 230 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 MAK16Q9BXY0 300 aaKnown RBP11.18□□□□□ -0.62
COL4A6-205ENST00000468338 CAAP1Q9H8G2 361 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 UCKL1Q9NWZ5 548 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 B4GALT6Q9UBX8 382 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PNMA8BQ9ULN7 279 aaPredicted RBP11.18□□□□□ -0.62
COL4A6-205ENST00000468338 COQ6Q9Y2Z9 468 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 NEUROG3Q9Y4Z2 214 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 PCDHGA1Q9Y5H4 931 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 HRH3Q9Y5N1 445 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 RAI2Q9Y5P3 530 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 CSNK1G3Q9Y6M4 447 aa11.18□□□□□ -0.62
COL4A6-205ENST00000468338 EPG5Q9HCE0 2579 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 KCNK1O00180 336 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 PSMD11O00231 422 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 MEN1O00255 615 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 TRIM38O00635 465 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 SCAMP1O15126 338 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 HYAL3O43820 417 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 SDC3O75056 442 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 HEXIM1O94992 359 aaKnown RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 ZRANB2O95218 330 aaKnown RBP eCLIP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 IPO7O95373 1038 aaKnown RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 LDOC1O95751 146 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 CPP00450 1065 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 JCHAINP01591 159 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 MMP2P08253 660 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 HOXC4P09017 264 aaPredicted RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 C1SP09871 688 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 LHCGRP22888 699 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 NFKBIAP25963 317 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 VIPR1P32241 457 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 CTNNA1P35221 906 aaKnown RBP11.17□□□□□ -0.62
COL4A6-205ENST00000468338 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 DSC2Q02487 901 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 ZBTB17Q13105 803 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 MTM1Q13496 603 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 TFDP2Q14188 446 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 PTK2BQ14289 1009 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 INPP5AQ14642 412 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 CNGA3Q16281 694 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 PPP2R5EQ16537 467 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 NPNTQ6UXI9 565 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 MACC1Q6ZN28 852 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 CHCHD4Q8N4Q1 142 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 EID2Q8N6I1 236 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 LRRC57Q8N9N7 239 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 FAM181AQ8N9Y4 354 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 CCNYQ8ND76 341 aa11.17□□□□□ -0.62
COL4A6-205ENST00000468338 ACRBPQ8NEB7 543 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms