RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 COQ10AQ96MF6 247 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 NSMCE3Q96MG7 304 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 ZNF599Q96NL3 588 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 SUDS3Q9H7L9 328 aaPredicted RBP17.29■□□□□ 0.36
TRIM56-203ENST00000467847 ZWILCHQ9H900 591 aa17.29■□□□□ 0.36
TRIM56-203ENST00000467847 SPTA1P02549 2419 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 PRAMEF33A0A0G2JMD5 474 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 LRRC53A6NM62 1247 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 PRAMEF10O60809 474 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 LRCH4O75427 683 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 FTLP02792 175 aaPredicted RBP17.28■□□□□ 0.36
TRIM56-203ENST00000467847 LIPCP11150 499 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 KRT10P13645 584 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 ASIC2Q16515 512 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 MAP9Q49MG5 647 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 PHF19Q5T6S3 580 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 DENND2CQ68D51 928 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 USP53Q70EK8 1073 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 LZTR1Q8N653 840 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 CMKLR1Q99788 373 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 HAUS4Q9H6D7 363 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 CARS2Q9HA77 564 aaKnown RBP17.28■□□□□ 0.36
TRIM56-203ENST00000467847 PHPT1Q9NRX4 125 aaPredicted RBP17.28■□□□□ 0.36
TRIM56-203ENST00000467847 SEPT10Q9P0V9 454 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 CNOT8Q9UFF9 292 aaKnown RBP17.28■□□□□ 0.36
TRIM56-203ENST00000467847 PCDHGC4Q9Y5F7 938 aa17.28■□□□□ 0.36
TRIM56-203ENST00000467847 H3BRJ5 948 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 HTRA2O43464 458 aaPredicted RBP17.27■□□□□ 0.36
TRIM56-203ENST00000467847 SOCS5O75159 536 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 CPP00450 1065 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 CCNB1P14635 433 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 VIPR1P32241 457 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 HSPA9P38646 679 aaKnown RBP17.27■□□□□ 0.36
TRIM56-203ENST00000467847 MAPK10P53779 464 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 MAZP56270 477 aaKnown RBP17.27■□□□□ 0.36
TRIM56-203ENST00000467847 CNGA3Q16281 694 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 TMPRSS9Q7Z410 1059 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 HEATR4Q86WZ0 1026 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 SLITRK4Q8IW52 837 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 GPBAR1Q8TDU6 330 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 SPOCK2Q92563 424 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 ZNF653Q96CK0 615 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 SGF29Q96ES7 293 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 GBP4Q96PP9 640 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 TEX101Q9BY14 249 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 SPATS2LQ9NUQ6 558 aaKnown RBP17.27■□□□□ 0.36
TRIM56-203ENST00000467847 HEMK1Q9Y5R4 338 aaPredicted RBP17.27■□□□□ 0.36
TRIM56-203ENST00000467847 SCINQ9Y6U3 715 aa17.27■□□□□ 0.36
TRIM56-203ENST00000467847 A0A1W2PQ67 120 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 RHPN2P1A8MT19 583 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 HEXIM1O94992 359 aaKnown RBP17.26■□□□□ 0.35
TRIM56-203ENST00000467847 GZMAP12544 262 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 NFKBIAP25963 317 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 ARL4AP40617 200 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 ETV5P41161 510 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 ETV3P41162 512 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 CSRP3P50461 194 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 B4GALNT1Q00973 533 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 ILF3Q12906 894 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRIM56-203ENST00000467847 SRSF6Q13247 344 aaKnown RBP17.26■□□□□ 0.35
TRIM56-203ENST00000467847 SMTNL2Q2TAL5 461 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 AMZ1Q400G9 498 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 TMCO3Q6UWJ1 677 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 ZNF571Q7Z3V5 609 aaPredicted RBP17.26■□□□□ 0.35
TRIM56-203ENST00000467847 PIM3Q86V86 326 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 ZDHHC1Q8WTX9 485 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 USP7Q93009 1102 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 NUDCD1Q96RS6 583 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 GSDMCQ9BYG8 508 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 SEMA6CQ9H3T2 930 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 RDH14Q9HBH5 336 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 NOD2Q9HC29 1040 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 RTN4Q9NQC3 1192 aaKnown RBP17.26■□□□□ 0.35
TRIM56-203ENST00000467847 KCTD5Q9NXV2 234 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 FOXJ2Q9P0K8 574 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 AKAP7Q9P0M2 348 aaPredicted RBP17.26■□□□□ 0.35
TRIM56-203ENST00000467847 TAAR2Q9P1P5 351 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 MYO1AQ9UBC5 1043 aa17.26■□□□□ 0.35
TRIM56-203ENST00000467847 GOLGA6CA6NDK9 693 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 GOLGA6BA6NDN3 693 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 ZW10O43264 779 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 CPNE6O95741 557 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 PEX11BO96011 259 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 FGF1P05230 155 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 CEACAM5P06731 702 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 GOLGA6DP0CG33 693 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 CYP2A6P11509 494 aaPredicted RBP17.25■□□□□ 0.35
TRIM56-203ENST00000467847 ALDH4A1P30038 563 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 PCK1P35558 622 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 GNPDA1P46926 289 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 OR1D5P58170 312 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 DPYSL2Q16555 572 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 MANEAQ5SRI9 462 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 VASH2Q86V25 355 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 ZFAND4Q86XD8 727 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 NRROSQ86YC3 692 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 BBS5Q8N3I7 341 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 PGBD5Q8N414 524 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 EXD3Q8N9H8 876 aa17.25■□□□□ 0.35
TRIM56-203ENST00000467847 HSPH1Q92598 858 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms