RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 SYT13Q7L8C5 426 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 GALNT7Q86SF2 657 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 NFE4Q86UQ8 179 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 FSIP1Q8NA03 581 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 LRRC59Q96AG4 307 aaKnown RBP3.69□□□□□ -1.82
XRN1-206ENST00000467077 TAF1DQ9H5J8 278 aaPredicted RBP3.69□□□□□ -1.82
XRN1-206ENST00000467077 G6PC2Q9NQR9 355 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 RRP7BPQ9NSQ0 103 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 KLQ9UEF7 1012 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 SRP68Q9UHB9 627 aaKnown RBP3.69□□□□□ -1.82
XRN1-206ENST00000467077 RNF215Q9Y6U7 377 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 TRPM2O94759 1503 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 ERBINQ96RT1 1412 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 SETD5Q9C0A6 1442 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 NCOA3Q9Y6Q9 1424 aa3.69□□□□□ -1.82
XRN1-206ENST00000467077 KIF15Q9NS87 1388 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 PLEKHG1Q9ULL1 1385 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.68□□□□□ -1.82
XRN1-206ENST00000467077 IPO5O00410 1097 aaKnown RBP3.68□□□□□ -1.82
XRN1-206ENST00000467077 SYN3O14994 580 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 PEX14O75381 377 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 DDAH2O95865 285 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 TUBBP07437 444 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 CYP4B1P13584 511 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 VEGFAP15692 232 aaPredicted RBP3.68□□□□□ -1.82
XRN1-206ENST00000467077 MYF6P23409 242 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 AVPR2P30518 371 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 GPR12P47775 334 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 RPS6KA3P51812 740 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 PRKAA2P54646 552 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 TUBB4BP68371 445 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 TIGD6Q17RP2 521 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 IRAK1BP1Q5VVH5 260 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 ARHGAP17Q68EM7 881 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 JMJD6Q6NYC1 403 aaPredicted RBP3.68□□□□□ -1.82
XRN1-206ENST00000467077 CCDC174Q6PII3 467 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 RASGRP2Q7LDG7 609 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 OR6Y1Q8NGX8 325 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 CSGALNACT1Q8TDX6 532 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 TRIB2Q92519 343 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 C3orf30Q96M34 536 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 LRFN5Q96NI6 719 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 CADM1Q9BY67 442 aaKnown RBP3.68□□□□□ -1.82
XRN1-206ENST00000467077 WDR13Q9H1Z4 485 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 ACAD9Q9H845 621 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 PLEKHA2Q9HB19 425 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 OSGIN2Q9Y236 505 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 RIMS2Q9UQ26 1411 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 UNC13BO14795 1591 aa3.68□□□□□ -1.82
XRN1-206ENST00000467077 SPHKAPQ2M3C7 1700 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 XRN1Q8IZH2 1706 aaKnown RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 PNPLA6Q8IY17 1366 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 COL22A1Q8NFW1 1626 aaPredicted RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 PTPN23Q9H3S7 1636 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 LMTK2Q8IWU2 1503 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 A0A096LPK6 155 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 CAPN9O14815 690 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 CCNT1O60563 726 aaKnown RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 KRT38O76015 456 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 CSF1P09603 554 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 PNPLA4P41247 253 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 DPP6P42658 865 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 MCM2P49736 904 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 LUMP51884 338 aaPredicted RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 RBM5P52756 815 aaKnown RBP eCLIP3.67□□□□□ -1.82
XRN1-206ENST00000467077 AADACL2Q6P093 401 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 BRSK2Q8IWQ3 736 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 GOLGA1Q92805 767 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 KTI12Q96EK9 354 aaPredicted RBP3.67□□□□□ -1.82
XRN1-206ENST00000467077 TMEM19Q96HH6 336 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 TTC14Q96N46 770 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 HERC2P3Q9BVR0 1158 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 SAYSD1Q9NPB0 183 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 THAP1Q9NVV9 213 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 UPB1Q9UBR1 384 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 E9PCH4 1651 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 ZFYVE9O95405 1425 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 NOS1P29475 1434 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 MYOM3Q5VTT5 1437 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 CGNL1Q0VF96 1302 aa3.67□□□□□ -1.82
XRN1-206ENST00000467077 LAMC1P11047 1609 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 C17orf100A8MU93 164 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 SEPT4O43236 478 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 FAM155BO75949 473 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 ARSAP15289 507 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 YWHAQP27348 245 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 DCTDP32321 178 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 CHKAP35790 457 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 KRTAP10-1P60331 282 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 BIRC2Q13490 618 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 CUL4BQ13620 913 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 THOC5Q13769 683 aaKnown RBP3.66□□□□□ -1.82
XRN1-206ENST00000467077 RUNDC3AQ59EK9 446 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 TCTE1Q5JU00 501 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 FAM122CQ6P4D5 195 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 DEFB132Q7Z7B7 95 aa3.66□□□□□ -1.82
XRN1-206ENST00000467077 ENAHQ8N8S7 591 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms