RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 ANKRD34CP0C6C1 535 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 FGF5P12034 268 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 ITIH2P19823 946 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 XPAP23025 273 aaPredicted RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 IRAK1P51617 712 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 SMSP52788 366 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 KCNK10P57789 538 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 SH3BP2P78314 561 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 CSNK1G2P78368 415 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 HMGN5P82970 282 aaKnown RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 ELP6Q0PNE2 266 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 AUHQ13825 339 aaKnown RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 CEBPEQ15744 281 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.59□□□□□ -0.39
UBR4-210ENST00000466969 DIEXFQ68CQ4 756 aaKnown RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 FCRL6Q6DN72 434 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 CYB5D1Q6P9G0 228 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 FAM180AQ6UWF9 173 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 C18orf12Q96KH6 178 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 SLX1AQ9BQ83 275 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 OLAHQ9NV23 265 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 TRNAU1APQ9NX07 287 aaKnown RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 CGNQ9P2M7 1197 aaKnown RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 SNX7Q9UNH6 387 aa12.59□□□□□ -0.39
UBR4-210ENST00000466969 FCF1Q9Y324 198 aaKnown RBP12.59□□□□□ -0.39
UBR4-210ENST00000466969 A0A0D9SEW6 157 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 FBXO21O94952 628 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 FYNP06241 537 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 SLC2A3P11169 496 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 FASLGP48023 281 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 YBX1P67809 324 aaKnown RBP12.58□□□□□ -0.4
UBR4-210ENST00000466969 OTUD4Q01804 1114 aaKnown RBP12.58□□□□□ -0.4
UBR4-210ENST00000466969 CDC16Q13042 620 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 TMEM52BQ4KMG9 183 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 FAM26FQ5R3K3 315 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 PLXDC1Q8IUK5 500 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 C12orf56Q8IXR9 622 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 PLA2G15Q8NCC3 412 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 LLPHQ9BRT6 129 aaKnown RBP12.58□□□□□ -0.4
UBR4-210ENST00000466969 MIS12Q9H081 205 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 ENKD1Q9H0I2 346 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 AKIRIN1Q9H9L7 192 aaPredicted RBP12.58□□□□□ -0.4
UBR4-210ENST00000466969 TNFRSF10DQ9UBN6 386 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 NOVA2Q9UNW9 492 aaKnown RBP12.58□□□□□ -0.4
UBR4-210ENST00000466969 CACNA1CQ13936 2221 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 ANKRD36A6QL64 1941 aa12.58□□□□□ -0.4
UBR4-210ENST00000466969 TRBV23OR9-2A0A075B6M9 112 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 RNF212BA8MTL3 300 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 FAM171A2A8MVW0 826 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 TRUB2O95900 331 aaKnown RBP12.57□□□□□ -0.4
UBR4-210ENST00000466969 HOXC4P09017 264 aaPredicted RBP12.57□□□□□ -0.4
UBR4-210ENST00000466969 INHBBP09529 407 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 CD19P15391 556 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 PCSK6P29122 969 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 TSFMP43897 325 aaKnown RBP12.57□□□□□ -0.4
UBR4-210ENST00000466969 GNPDA1P46926 289 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 SEPHS1P49903 392 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 ADAM8P78325 824 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 LAMB3Q13751 1172 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 DSG2Q14126 1118 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 MYBPC3Q14896 1274 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 GDPD4Q6W3E5 623 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 SETD3Q86TU7 594 aaPredicted RBP12.57□□□□□ -0.4
UBR4-210ENST00000466969 PLPP6Q8IY26 295 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 NRGNQ92686 78 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 WDR77Q9BQA1 342 aaPredicted RBP12.57□□□□□ -0.4
UBR4-210ENST00000466969 SPON2Q9BUD6 331 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 TRIM62Q9BVG3 475 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 BACH2Q9BYV9 841 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 STN1Q9H668 368 aaKnown RBP12.57□□□□□ -0.4
UBR4-210ENST00000466969 PDE7BQ9NP56 450 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 SH3BGRL2Q9UJC5 107 aa12.57□□□□□ -0.4
UBR4-210ENST00000466969 A0A0U1RQS6 177 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 POP4O95707 220 aaKnown RBP12.56□□□□□ -0.4
UBR4-210ENST00000466969 CCR1P32246 355 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 ACTR1BP42025 376 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 ACTR1AP61163 376 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 CTBSQ01459 385 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 HHEXQ03014 270 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 AGERQ15109 404 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 SYPL2Q5VXT5 272 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 PMF1Q6P1K2 205 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 EPM2AIP1Q7L775 607 aaPredicted RBP12.56□□□□□ -0.4
UBR4-210ENST00000466969 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 GUF1Q8N442 669 aaKnown RBP12.56□□□□□ -0.4
UBR4-210ENST00000466969 BCORP1Q8N888 145 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 SLC37A2Q8TED4 501 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 COG1Q8WTW3 980 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 LGR4Q9BXB1 951 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
UBR4-210ENST00000466969 WDR26Q9H7D7 661 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 PIKFYVEQ9Y2I7 2098 aa12.56□□□□□ -0.4
UBR4-210ENST00000466969 PPP1R3GB7ZBB8 358 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 MASP2O00187 686 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 SART1O43290 800 aaKnown RBP12.55□□□□□ -0.4
UBR4-210ENST00000466969 CA5AP35218 305 aa12.55□□□□□ -0.4
UBR4-210ENST00000466969 TXLNAP40222 546 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms