RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DCXO43602 365 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 PSMD10O75832 226 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 NFATC1O95644 943 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 SPATA31D3P0C874 917 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ATP4AP20648 1035 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 KCNA5P22460 613 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CYP3A7P24462 503 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ITGA3P26006 1051 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 MC4RP32245 332 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GLUD2P49448 558 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 FPGSQ05932 587 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ST3GAL1Q11201 340 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 C15orf59Q2T9L4 293 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 PAPD7Q5XG87 772 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 SPATA31D4Q6ZUB0 917 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ADAMTSL2Q86TH1 951 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 KIAA0319LQ8IZA0 1049 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 TNS4Q8IZW8 715 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 DLG3Q92796 817 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 MPP4Q96JB8 637 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 PDLIM2Q96JY6 352 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CFAP97Q9P2B7 532 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GPR25O00155 361 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 XKRYO14609 159 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 MEIS2O14770 477 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 PEX11AO75192 247 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ATP5F1P24539 256 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 HNRNPH1P31943 449 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 PPP2R2DQ66LE6 453 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 POMZP3Q6PJE2 187 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 RBFAQ8N0V3 343 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 RNF148Q8N7C7 305 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 TSPAN18Q96SJ8 248 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 MRPS17Q9Y2R5 130 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 TLL2Q9Y6L7 1015 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 SIGLEC16A6NMB1 481 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 UBOX5O94941 541 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 OR5F1O95221 314 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 GLRA2P23416 452 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 MAPK10P53779 464 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 SF1Q15637 639 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 SDHAF4Q5VUM1 108 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 KCNK18Q7Z418 384 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 ZCCHC9Q8N567 271 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 POU5F2Q8N7G0 328 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CAVIN3Q969G5 261 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 TIFAQ96CG3 184 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 NRDE2Q9H7Z3 1164 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 CKLFQ9UBR5 152 aa8.72□□□□□ -1.01
HPS4-209ENST00000466781 NDRG2Q9UN36 371 aaKnown RBP8.72□□□□□ -1.01
HPS4-209ENST00000466781 CXCR3P49682 368 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 SEC13P55735 322 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 RPP38P78345 283 aaKnown RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 STX12Q86Y82 276 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 KBTBD7Q8WVZ9 684 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 LINGO1Q96FE5 620 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 HSFY1Q96LI6 401 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 AIF1LQ9BQI0 150 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 BHLHE41Q9C0J9 482 aaPredicted RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 SGK2Q9HBY8 427 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 TBC1D14Q9P2M4 693 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 ERGIC3Q9Y282 383 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 BTRCQ9Y297 605 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 MRPS7Q9Y2R9 242 aaKnown RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 KCNE2Q9Y6J6 123 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 SSR2P43308 183 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 MANFP55145 182 aaKnown RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 SLC34A1Q06495 639 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 UGCGQ16739 394 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 LBX2Q6XYB7 198 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 UBE2R2Q712K3 238 aaPredicted RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 OTOP2Q7RTS6 562 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 C17orf64Q86WR6 236 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 ATXN2LQ8WWM7 1075 aaKnown RBP8.71□□□□□ -1.01
HPS4-209ENST00000466781 AP2M1Q96CW1 435 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 GPR20Q99678 358 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 ZNF222Q9UK12 451 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 OGDHLQ9ULD0 1010 aa8.71□□□□□ -1.01
HPS4-209ENST00000466781 IRGMA1A4Y4 181 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 LDOC1O95751 146 aaPredicted RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 TNFSF9P41273 254 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 RAB10P61026 200 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 SCRN3Q0VDG4 424 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ZNF697Q5TEC3 545 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 WDR93Q6P2C0 686 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 SLC51AQ86UW1 340 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 HIPK1Q86Z02 1210 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 TMC8Q8IU68 726 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 HCAR2Q8TDS4 363 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 FAR1Q8WVX9 515 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ZNF75CPQ92670 426 aaPredicted RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 SLC47A1Q96FL8 570 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 LMLNQ96KR4 655 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 TEFMQ96QE5 360 aaKnown RBP8.71□□□□□ -1.02
HPS4-209ENST00000466781 PRKAB1Q9Y478 270 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 ACTL7BQ9Y614 415 aa8.71□□□□□ -1.02
HPS4-209ENST00000466781 PTPRJQ12913 1337 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms