RNA–Protein interactions for RNA: ENST00000465788.1

SRM-203, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 402 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-203ENST00000465788 NUS1Q96E22 293 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 MED8Q96G25 268 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 NUDCD1Q96RS6 583 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 PEBP4Q96S96 227 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 HSD3B7Q9H2F3 369 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 HAUS4Q9H6D7 363 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 CYP4F12Q9HCS2 524 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 TRNAU1APQ9NX07 287 aaKnown RBP12.84□□□□□ -0.35
SRM-203ENST00000465788 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
SRM-203ENST00000465788 LRIT1Q9P2V4 623 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 B4GALT6Q9UBX8 382 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 MOSPD1Q9UJG1 213 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 CFAP46Q8IYW2 2715 aa12.84□□□□□ -0.35
SRM-203ENST00000465788 SPTA1P02549 2419 aa12.83□□□□□ -0.35
SRM-203ENST00000465788 J3QKU1 62 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 ATMINO43313 823 aaPredicted RBP12.83□□□□□ -0.36
SRM-203ENST00000465788 NOBOXO60393 691 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 PYGLP06737 847 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 CCNB1P14635 433 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 CDH6P55285 790 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 ZFP36L1Q07352 338 aaKnown RBP12.83□□□□□ -0.36
SRM-203ENST00000465788 BIRC2Q13490 618 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 ANO6Q4KMQ2 910 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 USP45Q70EL2 814 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 B3GNT8Q7Z7M8 397 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 ATPAF2Q8N5M1 289 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 ARFGAP1Q8N6T3 406 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 NPWQ8N729 165 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 GPBAR1Q8TDU6 330 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 TEKT4Q8WW24 435 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 COQ10AQ96MF6 247 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 DPYSL5Q9BPU6 564 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 MGME1Q9BQP7 344 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 TEX101Q9BY14 249 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 TMEM168Q9H0V1 697 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 RABGEF1Q9UJ41 708 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 LOXL2Q9Y4K0 774 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 PCDHB11Q9Y5F2 797 aa12.83□□□□□ -0.36
SRM-203ENST00000465788 BZW2Q9Y6E2 419 aaKnown RBP12.83□□□□□ -0.36
SRM-203ENST00000465788 B4DGG1 531 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 B8ZZF3 427 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 TEX33O43247 280 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 HEXIM1O94992 359 aaKnown RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 CPNE6O95741 557 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 ITGB2P05107 769 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 PRKCGP05129 697 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 SFTPCP11686 197 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 CR2P20023 1033 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 CES1P23141 567 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 GPR3P46089 330 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 SLC10A7Q0GE19 358 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 CNGA3Q16281 694 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 MAP9Q49MG5 647 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 FIGNQ5HY92 759 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 MARC1Q5VT66 337 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 CYP4V2Q6ZWL3 525 aaPredicted RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 ZNF571Q7Z3V5 609 aaPredicted RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 PIM3Q86V86 326 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 RAVER1Q8IY67 606 aaKnown RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 Q8N9G6 341 aaPredicted RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 ZSCAN1Q8NBB4 408 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 PDCD6IPQ8WUM4 868 aaKnown RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 IQCDQ96DY2 449 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 DTD2Q96FN9 168 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 SCRN2Q96FV2 425 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 FOXP3Q9BZS1 431 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 ISCUQ9H1K1 167 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 CARS2Q9HA77 564 aaKnown RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 RCOR3Q9P2K3 495 aaPredicted RBP12.82□□□□□ -0.36
SRM-203ENST00000465788 PISDQ9UG56 409 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 RNF215Q9Y6U7 377 aa12.82□□□□□ -0.36
SRM-203ENST00000465788 ATMQ13315 3056 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 RHPN2P1A8MT19 583 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 DDX3XO00571 662 aaKnown RBP eCLIP12.81□□□□□ -0.364e-17■■□□□ 13
SRM-203ENST00000465788 HGSO14964 777 aaPredicted RBP12.81□□□□□ -0.36
SRM-203ENST00000465788 IVLP07476 585 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 GM2AP17900 193 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 CA4P22748 312 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 MMP13P45452 471 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 DPTQ07507 201 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 TRA2AQ13595 282 aaKnown RBP eCLIP12.81□□□□□ -0.36
SRM-203ENST00000465788 NR1D2Q14995 579 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 TCEA2Q15560 299 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 ARMC12Q5T9G4 340 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 ARHGAP36Q6ZRI8 547 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 USP53Q70EK8 1073 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 ZNF438Q7Z4V0 828 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 POLNQ7Z5Q5 900 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 NLRP8Q86W28 1048 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 HEATR4Q86WZ0 1026 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
SRM-203ENST00000465788 SLITRK4Q8IW52 837 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 NIPA2Q8N8Q9 360 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 CCDC112Q8NEF3 446 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 ZDHHC1Q8WTX9 485 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 SGF29Q96ES7 293 aa12.81□□□□□ -0.36
SRM-203ENST00000465788 MCCC1Q96RQ3 725 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms