RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 TSPAN17Q96FV3 270 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 ASB2Q96Q27 587 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 FANCEQ9HB96 536 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 CMTM6Q9NX76 183 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 UBP1Q9NZI7 540 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 ANAPC2Q9UJX6 822 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 SBF1O95248 1867 aa19.77■□□□□ 0.76
SDF4-205ENST00000465727 TSPAN1O60635 241 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 ABCB7O75027 752 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 LDLRP01130 860 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 ALBP02768 609 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 ALOX5P09917 674 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 IGBP1P78318 339 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 NBPF12Q5TAG4 269 aaPredicted RBP19.77■□□□□ 0.75
SDF4-205ENST00000465727 ZNF470Q6ECI4 717 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 KIAA0930Q6ICG6 404 aaPredicted RBP19.77■□□□□ 0.75
SDF4-205ENST00000465727 RIOX2Q8IUF8 465 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 CLYBLQ8N0X4 340 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 GABPB2Q8TAK5 448 aaPredicted RBP19.77■□□□□ 0.75
SDF4-205ENST00000465727 TSPEARQ8WU66 669 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 LRRC58Q96CX6 371 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 ZNF641Q96N77 438 aaPredicted RBP19.77■□□□□ 0.75
SDF4-205ENST00000465727 TSGA13Q96PP4 275 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 PSD2Q9BQI7 771 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 EIF2AQ9BY44 585 aaKnown RBP19.77■□□□□ 0.75
SDF4-205ENST00000465727 FBXO5Q9UKT4 447 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 VWA7Q9Y334 891 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 CPQQ9Y646 472 aa19.77■□□□□ 0.75
SDF4-205ENST00000465727 CLDN25C9JDP6 229 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 ANXA9O76027 345 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 JCHAINP01591 159 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 EIF2S1P05198 315 aaKnown RBP19.76■□□□□ 0.75
SDF4-205ENST00000465727 EEF1B2P24534 225 aaKnown RBP19.76■□□□□ 0.75
SDF4-205ENST00000465727 SLC14A2Q15849 920 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 ZBTB6Q15916 424 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 RBM48Q5RL73 367 aaKnown RBP19.76■□□□□ 0.75
SDF4-205ENST00000465727 ESRP1Q6NXG1 681 aaKnown RBP19.76■□□□□ 0.75
SDF4-205ENST00000465727 LINC01465Q8N7H1 131 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 SNX19Q92543 992 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 LRCH3Q96II8 777 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 PPP1R2P1Q96PQ5 205 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 HEPHQ9BQS7 1158 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 BEGAINQ9BUH8 593 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 WDR12Q9GZL7 423 aaKnown RBP19.76■□□□□ 0.75
SDF4-205ENST00000465727 FBRSL1Q9HCM7 1045 aaKnown RBP19.76■□□□□ 0.75
SDF4-205ENST00000465727 HMG20AQ9NP66 347 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 PCDHA9Q9Y5H5 950 aa19.76■□□□□ 0.75
SDF4-205ENST00000465727 TCRBV5S2A0A599 114 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 KRBA1A5PL33 1030 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 INPP4BO15327 924 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 SNAP29O95721 258 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 CAPN3P20807 821 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 GSTM2P28161 218 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 GJA8P48165 433 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 CLCN5P51795 746 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ZNF280AP59817 542 aaPredicted RBP19.75■□□□□ 0.75
SDF4-205ENST00000465727 POU6F1Q14863 301 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 GTF2IRD2BQ6EKJ0 949 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 CCDC80Q76M96 950 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 GTF2IRD2Q86UP8 949 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 KCTD13Q8WZ19 329 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 CASP10Q92851 521 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 TNIP3Q96KP6 325 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 BDH2Q9BUT1 245 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 PRKD2Q9BZL6 878 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 AKTIPQ9H8T0 292 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 IL1RL2Q9HB29 575 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ERAP1Q9NZ08 941 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 SCHIP1Q9P0W5 487 aaPredicted RBP19.75■□□□□ 0.75
SDF4-205ENST00000465727 DAPK2Q9UIK4 370 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 AKT3Q9Y243 479 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 TLL2Q9Y6L7 1015 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ATP6AP2A0A1C7CYW4 349 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 UNCXA6NJT0 531 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 UBFD1O14562 309 aaKnown RBP19.75■□□□□ 0.75
SDF4-205ENST00000465727 HCRTO43612 131 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ATP6AP2O75787 350 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 DNAJB5O75953 348 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 POLR2IP36954 125 aaKnown RBP19.75■□□□□ 0.75
SDF4-205ENST00000465727 NFKB2Q00653 900 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 OCA2Q04671 838 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ARL13BQ3SXY8 428 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 UGT3A2Q3SY77 523 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 VPS26BQ4G0F5 336 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 SYPL2Q5VXT5 272 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 CLEC6AQ6EIG7 209 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 XAF1Q6GPH4 301 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 LBX2Q6XYB7 198 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 CALML6Q8TD86 181 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 USP33Q8TEY7 942 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 NDRG1Q92597 394 aaKnown RBP19.75■□□□□ 0.75
SDF4-205ENST00000465727 UBXN10Q96LJ8 280 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 DUSP16Q9BY84 665 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ALG2Q9H553 416 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 TREX1Q9NSU2 369 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 FBXW11Q9UKB1 542 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 GIT1Q9Y2X7 761 aa19.75■□□□□ 0.75
SDF4-205ENST00000465727 ZFC3H1O60293 1989 aaKnown RBP19.75■□□□□ 0.75
SDF4-205ENST00000465727 TYW5A2RUC4 315 aaKnown RBP19.74■□□□□ 0.75
SDF4-205ENST00000465727 ZNF24P17028 368 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms