RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 ANXA9O76027 345 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 C1SP09871 688 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 STIP1P31948 543 aaKnown RBP20.34■□□□□ 0.85
SKA3-205ENST00000465471 RABIFP47224 123 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 STC1P52823 247 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 ATXN3P54252 364 aaPredicted RBP20.34■□□□□ 0.85
SKA3-205ENST00000465471 GEMP55040 296 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 PTSQ03393 145 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 ARHGEF7Q14155 803 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 LONRF2Q1L5Z9 754 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 RSPO4Q2I0M5 234 aaPredicted RBP20.34■□□□□ 0.85
SKA3-205ENST00000465471 P3H1Q32P28 736 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 KDM7AQ6ZMT4 941 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 Q6ZSR6 202 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 COG1Q8WTW3 980 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 RMDN1Q96DB5 314 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 IFT43Q96FT9 208 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 KCTD5Q9NXV2 234 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 DLL3Q9NYJ7 618 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 SCN8AQ9UQD0 1980 aa20.34■□□□□ 0.85
SKA3-205ENST00000465471 CABIN1Q9Y6J0 2220 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 DFNA5O60443 496 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 ADRA1AP35348 466 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 ETV3P41162 512 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 YPEL5P62699 121 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 MTM1Q13496 603 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 ACOX1Q15067 660 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 TPRG1LQ5T0D9 272 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 ESRP1Q6NXG1 681 aaKnown RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 KDELC2Q7Z4H8 507 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 PTAR1Q7Z6K3 402 aaPredicted RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 DCP2Q8IU60 420 aaKnown RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 PRELID2Q8N945 189 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 ACTRT1Q8TDG2 376 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 NUS1Q96E22 293 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 MS4A14Q96JA4 679 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 PPP1R2P1Q96PQ5 205 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 ELF4Q99607 663 aaPredicted RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 MAGEE1Q9HCI5 957 aa20.33■□□□□ 0.85
SKA3-205ENST00000465471 CDV3Q9UKY7 258 aaKnown RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 DRG1Q9Y295 367 aaKnown RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 AAR2Q9Y312 384 aaKnown RBP20.33■□□□□ 0.85
SKA3-205ENST00000465471 SPTY2D1-AS1A0A0U1RR47 76 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 A0A1B0GTQ1 180 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 FANCGO15287 622 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 CLDN7O95471 211 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 METTL18O95568 372 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 HLA-DPA1P20036 260 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 SDHBP21912 280 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 RXRGP48443 463 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 GNG11P61952 73 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 SLC14A1Q13336 389 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 SNX1Q13596 522 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 SHBQ15464 509 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 SLC1A5Q15758 541 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 PARP6Q2NL67 630 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 SIRPB2Q5JXA9 342 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 KCTD11Q693B1 232 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 ARHGEF18Q6ZSZ5 1173 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 Q6ZVL8 140 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 PELI3Q8N2H9 469 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 OXR1Q8N573 874 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 PLA2G15Q8NCC3 412 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 IPMKQ8NFU5 416 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 EID2BQ96D98 161 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 HOMER3Q9NSC5 361 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 ZNF148Q9UQR1 794 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 PCDHGB2Q9Y5G2 931 aa20.32■□□□□ 0.84
SKA3-205ENST00000465471 C1orf232A0A0U1RR37 186 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 PGRMC1O00264 195 aaKnown RBP20.31■□□□□ 0.84
SKA3-205ENST00000465471 TEAD1P28347 426 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 TRIM23P36406 574 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 CHRNA4P43681 627 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 CCT8P50990 548 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 DPTQ07507 201 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 FZD2Q14332 565 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 PRPSAP1Q14558 356 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 PAPD7Q5XG87 772 aaKnown RBP20.31■□□□□ 0.84
SKA3-205ENST00000465471 RANBP10Q6VN20 620 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 DBX2Q6ZNG2 339 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 ZNF765Q7L2R6 523 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 LYSMD3Q7Z3D4 306 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 NLRP8Q86W28 1048 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 RTKNQ9BST9 563 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 FSD1LQ9BXM9 530 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 ZNF711Q9Y462 761 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 SPO11Q9Y5K1 396 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 LRP4O75096 1905 aa20.31■□□□□ 0.84
SKA3-205ENST00000465471 PCDHGA12O60330 932 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 PCCBP05166 539 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 FGF1P05230 155 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 CD59P13987 128 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 TCP1P17987 556 aaKnown RBP20.3■□□□□ 0.84
SKA3-205ENST00000465471 PDE1CQ14123 709 aaPredicted RBP20.3■□□□□ 0.84
SKA3-205ENST00000465471 INPP5AQ14642 412 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 CYP1B1Q16678 543 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 DENND2CQ68D51 928 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 CCDC70Q6NSX1 233 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 RFLNAQ6ZTI6 216 aa20.3■□□□□ 0.84
SKA3-205ENST00000465471 TMC3Q7Z5M5 1100 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms