RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TRMT13Q9NUP7 481 aaKnown RBP18.34■□□□□ 0.53
SYNE4-204ENST00000465425 SLC12A8A0AV02 714 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 PRORSD1PA6NEY8 169 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 TRIM24O15164 1050 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 INPPL1O15357 1258 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 C8BP07358 591 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 CD1DP15813 335 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 FDXRP22570 491 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 RHDQ02161 417 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 TNK2Q07912 1038 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 TRAP1Q12931 704 aaKnown RBP18.33■□□□□ 0.53
SYNE4-204ENST00000465425 RBBP5Q15291 538 aaKnown RBP18.33■□□□□ 0.53
SYNE4-204ENST00000465425 UNC50Q53HI1 259 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 SAMD4BQ5PRF9 694 aaKnown RBP18.33■□□□□ 0.53
SYNE4-204ENST00000465425 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 LPGAT1Q92604 370 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 PEX13Q92968 403 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 TADA1Q96BN2 335 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 FAM193BQ96PV7 902 aaPredicted RBP18.33■□□□□ 0.53
SYNE4-204ENST00000465425 TLR8Q9NR97 1041 aaKnown RBP18.33■□□□□ 0.53
SYNE4-204ENST00000465425 HACD3Q9P035 362 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 APPL1Q9UKG1 709 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 MTF2Q9Y483 593 aaPredicted RBP18.33■□□□□ 0.53
SYNE4-204ENST00000465425 COMMD3-BMI1R4GMX3 469 aa18.33■□□□□ 0.53
SYNE4-204ENST00000465425 ACADVLP49748 655 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 ATP4BP51164 291 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 DSC1Q08554 894 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 CRHR2Q13324 411 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 GALNT3Q14435 633 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 VARS2Q5ST30 1063 aaKnown RBP18.33■□□□□ 0.52
SYNE4-204ENST00000465425 ISLR2Q6UXK2 745 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 PTGR2Q8N8N7 351 aaPredicted RBP18.33■□□□□ 0.52
SYNE4-204ENST00000465425 PCYOX1LQ8NBM8 494 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 FBRSL1Q9HCM7 1045 aaKnown RBP18.33■□□□□ 0.52
SYNE4-204ENST00000465425 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.33■□□□□ 0.52
SYNE4-204ENST00000465425 CNOT11Q9UKZ1 510 aaKnown RBP18.33■□□□□ 0.52
SYNE4-204ENST00000465425 LZTS1Q9Y250 596 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 SLC4A7Q9Y6M7 1214 aa18.33■□□□□ 0.52
SYNE4-204ENST00000465425 GJB3O75712 270 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 RPP40O75818 363 aaKnown RBP18.32■□□□□ 0.52
SYNE4-204ENST00000465425 ACVRL1P37023 503 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 CTXN3Q4LDR2 81 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 TTC9BQ8N6N2 239 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 BRSK1Q8TDC3 778 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 SH3RF2Q8TEC5 729 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 NAT14Q8WUY8 206 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 NCSTNQ92542 709 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 FEM1CQ96JP0 617 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 SEMA6AQ9H2E6 1030 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 RRAGCQ9HB90 399 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 MID1IP1Q9NPA3 183 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 CATSPERZQ9NTU4 200 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 TMEM189-UBE2V1I3L0A0 370 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 EOMESO95936 686 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 SERPINF2P08697 491 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 FAM58BPP0C7Q3 252 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 PIRTP0C851 137 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 SMIM18P0DKX4 95 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 HSPA8P11142 646 aaKnown RBP18.32■□□□□ 0.52
SYNE4-204ENST00000465425 ETS2P15036 469 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 ZNF37AP17032 561 aaPredicted RBP18.32■□□□□ 0.52
SYNE4-204ENST00000465425 RPL5P46777 297 aaKnown RBP18.32■□□□□ 0.52
SYNE4-204ENST00000465425 SH3BGRP55822 239 aaPredicted RBP18.32■□□□□ 0.52
SYNE4-204ENST00000465425 ARPP19P56211 112 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 YBEYP58557 167 aaPredicted RBP18.32■□□□□ 0.52
SYNE4-204ENST00000465425 SH3BP2P78314 561 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 ACVR1Q04771 509 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 PTPRCAPQ14761 206 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 PFKFB4Q16877 469 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 ZNF549Q6P9A3 640 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 CYP2R1Q6VVX0 501 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 COLGALT2Q8IYK4 626 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 AHI1Q8N157 1196 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 OR13C4Q8NGS5 318 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 OR4L1Q8NH43 312 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 PBXIP1Q96AQ6 731 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 C3orf30Q96M34 536 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 EFHD1Q9BUP0 239 aa18.32■□□□□ 0.52
SYNE4-204ENST00000465425 DOCK4Q8N1I0 1966 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CCDC162PA2VCL2 907 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 DRGXA6NNA5 263 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 SOAT2O75908 522 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CSPG5O95196 566 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CAPNS1P04632 268 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 GFAPP14136 432 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 MAGEA11P43364 429 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 TAF10Q12962 218 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 DYNC1I2Q13409 638 aaKnown RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 NRF1Q16656 503 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CLLU1OSQ5K130 101 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 ACBD5Q5T8D3 534 aaPredicted RBP18.31■□□□□ 0.52
SYNE4-204ENST00000465425 HACD2Q6Y1H2 254 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 CYHR1Q6ZMK1 362 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 SLC24A5Q71RS6 500 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 GPR150Q8NGU9 434 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 LRTOMTQ8WZ04 291 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 ROPN1LQ96C74 230 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 AKTIPQ9H8T0 292 aa18.31■□□□□ 0.52
SYNE4-204ENST00000465425 POLR3BQ9NW08 1133 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms